Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2005 ATGGCATCTTGTTCCTCAAAGAACTGGAAGAGCTGCAGAATGAGATGGTTGAATTATCTGAAACCCAACATCAACCGAGGAAGCTTCACCGACGACGAGGTTGACATGATTCAAAGGTTCCATAAACTTCTGGGCAACAGATGGTCGTTGATAGCTGGAAGGCTGCCAGGAAGAACAGCGAATGACGTGAAGAATTTCTGGCACACCAACATGCGGAAGAGGAAGAATAAAGAAGAAAGCCATGGGACGAAAGCAAAAGAGGATCAGACAGAAGAAGTAAAACAGCACGTAGTGATAAAACCTCAGCCTCACACTTTCTCTAAGAATTCGCCATGGCTGAGGAGGAATAATAATAATATTAAGATTGTTTCCGCAAGTGAAGGTGGTGACACTGATATTATTAATGCTGAAACTGGAACTAGTTCTAGTGGTGATATGAAAGAGAGTGTTGCAGAGCCATGTGCTGTTCATTTTACTCAGAGAGATAAATTAGAAGCGTGGTGGGCGAGTTTGCTGAATGATGAAGGAGATGATGAAGGGCAAGCTGGGAATTTCACTATGGAGTTTTGGGACCAAGAAGATTTTCTGAAAATTGAAGGTCCATTCGGGGAAGGCCTGGGTAGTTGTTGGAGTCAGTCATTGCTCATATAA 651 0.4316 MASCSSKNWKSCRMRWLNYLKPNINRGSFTDDEVDMIQRFHKLLGNRWSLIAGRLPGRTANDVKNFWHTNMRKRKNKEESHGTKAKEDQTEEVKQHVVIKPQPHTFSKNSPWLRRNNNNIKIVSASEGGDTDIINAETGTSSSGDMKESVAEPCAVHFTQRDKLEAWWASLLNDEGDDEGQAGNFTMEFWDQEDFLKIEGPFGEGLGSCWSQSLLI 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2005 216 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 75 IPR017930 -
Prci2g2005 216 MobiDBLite consensus disorder prediction 73 94 - -
Prci2g2005 216 SMART sant 25 73 IPR001005 -
Prci2g2005 216 Gene3D - 28 100 - -
Prci2g2005 216 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 9 96 - -
Prci2g2005 216 Pfam Myb-like DNA-binding domain 26 69 IPR001005 -
Prci2g2005 216 CDD SANT 28 71 IPR001005 -
Prci2g2005 216 ProSiteProfiles Myb-like domain profile. 21 71 IPR001005 -
Prci2g2005 216 SUPERFAMILY Homeodomain-like 5 78 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2005 Prci-Chr2 15212751 15214914 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2005 10 172 MYB Transcription Factor Family AT1G66370 43.353 4.20e-35 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci2g2005 Myb_DNA-binding 1.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g2005 - K16166 pcin:129304058 438.343