Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1995 ATGAGAAAGCCTTGCTGTGAAAAACAAGACACCAACAAAGGAGCTTGGTCTAAGCAAGAAGACCAAAAGCTCATCGATTACATCCAAACTCATGGTGAAGGCTGTTGGCGTTCCCTTCCCAAAGCCGCAGGGCTGCATCGTTGCGGAAAAAGTTGCAGGTTGAGATGGATAAATTATTTGAAGCCTGATATCAAACGTGGAAACTTTGCTCAAGACGAAGAAGACCTCATCATCAAGCTCCATGCCCTCCTCGGCAACCGGTGGTCCTTGATAGCTGGAAGGTTGCCTGGAAGAACAGACAACGAGATAAAGAACTATTGGAATTCTCACATCCGTAGGAAGCTAACGAAGATGGGTATAGACCCTGAGAACCATAAGCTTCATCTTCACCAGAGCTTTCATAATCATCGTCCTCGTCATGATGATGACGATGATGATGCCCTACCGGCTGCTGCCGCGACATCCTCTGACTCATTAAAGGAAAAAGAAAAACCATCGTCCAAGTTGAATCTTGACCTCACTATTGCTTTTCCTTCTCGCACTGCACCAAACCTAAATTCTGCTGAGTCCTCCCACAATACTGCTGCTAATAATAAGGACATGGATCAGAGCCAATCAGCTCCAACCCTTCCTCTATTTAACTAG 645 0.4574 MRKPCCEKQDTNKGAWSKQEDQKLIDYIQTHGEGCWRSLPKAAGLHRCGKSCRLRWINYLKPDIKRGNFAQDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEIKNYWNSHIRRKLTKMGIDPENHKLHLHQSFHNHRPRHDDDDDDALPAAAATSSDSLKEKEKPSSKLNLDLTIAFPSRTAPNLNSAESSHNTAANNKDMDQSQSAPTLPLFN 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1995 214 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Prci2g1995 214 MobiDBLite consensus disorder prediction 172 214 - -
Prci2g1995 214 MobiDBLite consensus disorder prediction 133 147 - -
Prci2g1995 214 FunFam MYB transcription factor 67 128 - -
Prci2g1995 214 CDD SANT 68 111 IPR001005 -
Prci2g1995 214 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Prci2g1995 214 CDD SANT 15 60 IPR001005 -
Prci2g1995 214 FunFam MYB-related transcription factor 12 65 - -
Prci2g1995 214 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 193 - -
Prci2g1995 214 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Prci2g1995 214 Gene3D - 13 65 - -
Prci2g1995 214 SMART sant 12 62 IPR001005 -
Prci2g1995 214 SMART sant 65 113 IPR001005 -
Prci2g1995 214 MobiDBLite consensus disorder prediction 133 214 - -
Prci2g1995 214 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Prci2g1995 214 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Prci2g1995 214 Gene3D - 68 144 - -
Prci2g1995 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Prci2g1995 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1995 Prci-Chr2 15047196 15048874 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1995 2 179 MYB Transcription Factor Family AT4G09460 55.122 1.80e-78 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci2g1995 Myb_DNA-binding 2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1995 K09422 - tcc:18601922 288.5