Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1991 ATGGGTTGCTGCTTCAGTGCGAAGATCAAAGCTGAAAGCCCTCCACGCAAGGATAGGAACTCAAGCCATGACAGCAAAGAAGAGGATGGTTTGATTGGTGGAAGCAGCAAGTTCTCCACTTCCTCTGTGCCTCCGACTCCTCGAACAGAGGGTGAGATCTTGCAGTCCTCCAATTTGAAAAATTTCGCATATAATGAGCTAAAAACAGCTACAAGGAACTTTCGTCCGGACAGTATGGTGGGCGAAGGTGGGTTTGGAGGCGTATTTAAGGGGTGGGTTGATGAACAGACACTTGCTCCAGCTAAACCAGGGACTGGGATTGTCATTGCTGTGAAGAAGCTTAACCAAGAAGGCTGCCAGGGACACAATGAATGGTTGACAGAGATCAATTTTCTGGGACAGCTGCATCATCCTAACCTTGTGAAATTGATTGGTTACTGCTTAGAGGATGACCACCGGCTTCTGGTATATGAGTTTTTGACCAAAGGCAGCTTGGATAATCATTTATTTCGAAGGACATCTCATGTTGAACCCCTTTCTTGGAGCAACCGCATGAAAATTGCCCTTGATGCTGCAAAGGGTCTTGCATTTCTTCATAGTGACGGAGTAAAAGTGATATATCGAGACCTAAAAGCATCTAATATCTTGCTTGATTCAAACTTCAATGCAAAGCTATCTGATTTTGGATTGGCAAAGGACGGACCATCAGATGATAAGAGCCATGTCTCTACCAGGGTCATGGGCACCTATGGCTATGCTGCTCCTGAGTATATGGCCACAGGTCACCTAACCAAGAAGAGTGATGTATACACTTTCGGGGTTGTTCTGCTTGAAATCATGTCCGGCAAACGTGCACTGGACAGAAACAGGCCAGGCAGGGAACAGAATTTGGTTGAATGGGCCAAGCCATACCTTTCAAGCAAGCGCCGGATTTTCCAAGTTATGGATGCTCGTATCGAAGGCCAGTACCTGGTGCGTGAGGCCATGAAACTAGCAAAAATCGCGATCCAATGCCTTTCTGTAGAACCGAGATTCAGACCGACCATGGCCGATGTGGTTGGAGCATTGGAACAGCTTCAGGATTGCAGTGATACAGGTGGCTCAAGCAATAGCAGCAGCAGCAGCAATGTCCCTAAACAGCATGTAAGAAGTACGAATGAATCTTTACATGGGGTTGGAACTTCTGGGACCAGATCATCTTCTTCTCATTCCACATGA 1218 0.4663 MGCCFSAKIKAESPPRKDRNSSHDSKEEDGLIGGSSKFSTSSVPPTPRTEGEILQSSNLKNFAYNELKTATRNFRPDSMVGEGGFGGVFKGWVDEQTLAPAKPGTGIVIAVKKLNQEGCQGHNEWLTEINFLGQLHHPNLVKLIGYCLEDDHRLLVYEFLTKGSLDNHLFRRTSHVEPLSWSNRMKIALDAAKGLAFLHSDGVKVIYRDLKASNILLDSNFNAKLSDFGLAKDGPSDDKSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYTFGVVLLEIMSGKRALDRNRPGREQNLVEWAKPYLSSKRRIFQVMDARIEGQYLVREAMKLAKIAIQCLSVEPRFRPTMADVVGALEQLQDCSDTGGSSNSSSSSNVPKQHVRSTNESLHGVGTSGTRSSSSHST 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1991 405 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
Prci2g1991 405 Gene3D Transferase(Phosphotransferase) domain 1 160 381 - -
Prci2g1991 405 MobiDBLite consensus disorder prediction 361 405 - -
Prci2g1991 405 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Prci2g1991 405 MobiDBLite consensus disorder prediction 1 51 - -
Prci2g1991 405 CDD STKc_IRAK 105 359 - -
Prci2g1991 405 MobiDBLite consensus disorder prediction 11 31 - -
Prci2g1991 405 MobiDBLite consensus disorder prediction 34 51 - -
Prci2g1991 405 Pfam Protein tyrosine and serine/threonine kinase 78 355 IPR001245 GO:0004672|GO:0006468
Prci2g1991 405 SMART serkin_6 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1991 405 SUPERFAMILY Protein kinase-like (PK-like) 46 355 IPR011009 -
Prci2g1991 405 FunFam Serine/threonine-protein kinase PBS1 160 375 - -
Prci2g1991 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Prci2g1991 405 PANTHER OS01G0588500 PROTEIN-RELATED 29 360 - -
Prci2g1991 405 ProSitePatterns Protein kinases ATP-binding region signature. 80 113 IPR017441 GO:0005524
Prci2g1991 405 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1991 Prci-Chr2 14996498 15000545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1991 1 356 Glycoside Hydrolase AT3G07070 46.070 6.78e-108 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci2g1991 PK_Tyr_Ser-Thr 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1991 - - gmx:100800735 602.438