Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g1981 | ATGGCTCTCCTCACTTCCCTCGCCATTATTGTTTCCCTCATTGCTTCTCTAACCCTCACCCATGCTAAAATTCCCGGCGTCTACTCCGGCGGAGAGTGGCAGAACGCCCACGCTACTTTCTACGGCGGCAGTGACGCCTCCGGCACCATGGGAGGCGCGTGTGGGTATGGGAACTTGTACAGCCAAGGGTATGGGGTGAACACGGCGGCGCTGAGCACGGCTCTGTTCAACAATGGCCTGAGCTGTGGGGCTTGCTTCGAGATCAAGTGCGGCAGCGACCCACAATGGTGCCATCCCGGCAGCCCGTCGATCTTCGTGACGGCCACCAACTTTTGCCCACCCAACTATGCTCTTCCCAGCGACAATGGCGGCTGGTGCAACCCCCCACGGCCACATTTCGACCTCGCCATGCCCATGTTCCTCAAGATCGCCGAGTACCGCGCCGGCATCGTGCCCGTCTCTTACCGCCGGATACCTTGCCGGAAAAGCGGAGGGATAAGGTTTACGATCAACGGGTTCAAGTACTTCAACCTGGTTCTGATAACGAACGTGGCCGGCGCCGGGGATGTTGTGAGGGTGAGCGTGAAGGGGTCGAAGACGGAGTGGATGAACATGAGCCGTAATTGGGGTCAGAACTGGCAATCCAACGCCGTCCTGATCGGTCAGTCACTGTCCTTCAGGGTCACCGGCAGCGACCGGCGGACATCCACCTCCTGGAACATCGTCCCTTCCAACTGGCAATTCGGCCAAACCTTCACCGGCAAGAACTTCAGGGTCTGA | 780 | 0.591 | MALLTSLAIIVSLIASLTLTHAKIPGVYSGGEWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCGSDPQWCHPGSPSIFVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRIPCRKSGGIRFTINGFKYFNLVLITNVAGAGDVVRVSVKGSKTEWMNMSRNWGQNWQSNAVLIGQSLSFRVTGSDRRTSTSWNIVPSNWQFGQTFTGKNFRV | 259 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g1981 | 259 | SUPERFAMILY | Barwin-like endoglucanases | 32 | 183 | IPR036908 | - | |
Prci2g1981 | 259 | Gene3D | - | 19 | 161 | IPR036908 | - | |
Prci2g1981 | 259 | SUPERFAMILY | PHL pollen allergen | 162 | 254 | IPR036749 | - | |
Prci2g1981 | 259 | FunFam | Expansin | 165 | 257 | - | - | |
Prci2g1981 | 259 | Pfam | Lytic transglycolase | 68 | 155 | IPR009009 | - | |
Prci2g1981 | 259 | SMART | dpbb_1 | 68 | 155 | IPR007112 | - | |
Prci2g1981 | 259 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 51 | 165 | IPR007112 | - | |
Prci2g1981 | 259 | Pfam | Expansin C-terminal domain | 166 | 243 | IPR007117 | - | |
Prci2g1981 | 259 | PRINTS | Expansin/Lol pI family signature | 32 | 47 | IPR007118 | GO:0005576 | |
Prci2g1981 | 259 | PRINTS | Expansin/Lol pI family signature | 148 | 164 | IPR007118 | GO:0005576 | |
Prci2g1981 | 259 | PRINTS | Expansin/Lol pI family signature | 202 | 216 | IPR007118 | GO:0005576 | |
Prci2g1981 | 259 | PRINTS | Expansin/Lol pI family signature | 240 | 254 | IPR007118 | GO:0005576 | |
Prci2g1981 | 259 | PRINTS | Expansin/Lol pI family signature | 72 | 90 | IPR007118 | GO:0005576 | |
Prci2g1981 | 259 | PRINTS | Expansin/Lol pI family signature | 50 | 68 | IPR007118 | GO:0005576 | |
Prci2g1981 | 259 | Gene3D | - | 165 | 257 | IPR036749 | - | |
Prci2g1981 | 259 | PANTHER | EXPANSIN-A15 | 18 | 257 | IPR002963 | GO:0009664 | |
Prci2g1981 | 259 | PRINTS | Expansin signature | 164 | 176 | IPR002963 | GO:0009664 | |
Prci2g1981 | 259 | PRINTS | Expansin signature | 140 | 153 | IPR002963 | GO:0009664 | |
Prci2g1981 | 259 | PRINTS | Expansin signature | 90 | 101 | IPR002963 | GO:0009664 | |
Prci2g1981 | 259 | PRINTS | Expansin signature | 240 | 256 | IPR002963 | GO:0009664 | |
Prci2g1981 | 259 | PRINTS | Expansin signature | 104 | 114 | IPR002963 | GO:0009664 | |
Prci2g1981 | 259 | PRINTS | Expansin signature | 123 | 140 | IPR002963 | GO:0009664 | |
Prci2g1981 | 259 | PRINTS | Expansin signature | 176 | 197 | IPR002963 | GO:0009664 | |
Prci2g1981 | 259 | PRINTS | Expansin signature | 63 | 77 | IPR002963 | GO:0009664 | |
Prci2g1981 | 259 | PRINTS | Expansin signature | 211 | 232 | IPR002963 | GO:0009664 | |
Prci2g1981 | 259 | FunFam | Expansin | 22 | 161 | - | - | |
Prci2g1981 | 259 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 175 | 254 | IPR007117 | - | |
Prci2g1981 | 259 | CDD | DPBB_EXPA_N | 32 | 160 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci2g1981 | Prci-Chr2 | 14947419 | 14949601 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci2g1981 | 3 | 259 | Expansin Gene Family | AT2G39700 | 82.490 | 4.07e-166 | 458 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g1981 | - | - | jre:108986296 | 502.286 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Prci2g1981 | 2 | 14947419 | 14949601 | Prci2g1981 | 2 | 14947419 | 14949601 | CCT | |
Prci2g1981 | 2 | 14947419 | 14949601 | Prci2g1981 | 2 | 14947419 | 14949601 | ECH |