Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g1971 | ATGAGTTTTATTTTGAGAGGAACAAGAGCAGACATAGAAAGTGGATTTCCTGGATTTATTCCTGAGAGGCATGCATTGCGTGTTCATGCAGCACGACCTGCTAATTCCAATTCTCTCACTTTTCTTGTCACAGTTCTTCTGCTATTCATGATACTGAACTCTCACCAGATGTCACCAAATTTTCTGCTTTGGCTGGTCCTAGGTGTCTTCTTGATGGCTACAATGTTAAGGATGTATGCAACTTGTCAGCAACTTCAAGCTGAGGCTCATGCCCATACAGCAGCGGGCAGCGGTGGCCTTCTTGGGCACACTGAAGTACGATTACATGTGCCATCATCAATGGCACTTACCACCCGAGGACGTCTACAAGGCCTTAGGCTTCAGCTTGCACTTCTTGACCGGGAGTTTGATGATTTAGATTATGAAACTTTAAGAGCTCTGGATTCAGATAATGCTCCGCCAGCACCTTCCATGACTGATGAAGAGATAAATGCTCTTCCTGTTCACAAATACAAGGGTTCTGGTCTCCAGAACAGGAAATCCTCAATGCAACAGACCTCATCTTCCACCTTTGCTGAGAAGAAGCAAGATGCGTCAAATGCAGTTGGTAGTACAAAGGCCTCTGATGATGAGCTGACCTGCAGTGTATGTTTGGAGCAAGTTAACGTTGATCTACTCCGTAGCTTGCCCTGCTTACATCAGTTTCATGCCAATTGCATTGACCCATGGCTGCGGCAACAAGGGACGTGTCCTGTCTGTAAATTCAGAGCAGGATCTACGTGGCATGAGAGTGAACAGAATGAAGTTGATGCTTCAGACATGGTTTGA | 828 | 0.4565 | MSFILRGTRADIESGFPGFIPERHALRVHAARPANSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAEAHAHTAAGSGGLLGHTEVRLHVPSSMALTTRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPPAPSMTDEEINALPVHKYKGSGLQNRKSSMQQTSSSTFAEKKQDASNAVGSTKASDDELTCSVCLEQVNVGXLLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSTWHESEQNEVDASDMV | 276 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g1971 | 276 | Pfam | Ring finger domain | 213 | 255 | IPR001841 | - | |
Prci2g1971 | 276 | CDD | RING-H2_PA-TM-RING | 213 | 255 | - | - | |
Prci2g1971 | 276 | MobiDBLite | consensus disorder prediction | 175 | 197 | - | - | |
Prci2g1971 | 276 | SUPERFAMILY | RING/U-box | 209 | 258 | - | - | |
Prci2g1971 | 276 | PANTHER | TARGET OF ERK KINASE MPK-1 | 5 | 260 | - | - | |
Prci2g1971 | 276 | ProSiteProfiles | Zinc finger RING-type profile. | 214 | 255 | IPR001841 | - | |
Prci2g1971 | 276 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 186 | 260 | IPR013083 | - | |
Prci2g1971 | 276 | SMART | ring_2 | 214 | 254 | IPR001841 | - | |
Prci2g1971 | 276 | MobiDBLite | consensus disorder prediction | 174 | 197 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci2g1971 | Prci-Chr2 | 14800979 | 14807545 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci2g1971 | 1 | 276 | C3H Transcription Factor Family | AT3G55530 | 73.285 | 6.87e-137 | 385 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g1971 | K16283 | - | gmx:100777936 | 426.017 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Prci2g1971 | 2 | 14800979 | 14807545 | Prci2g1971 | 2 | 14800979 | 14807545 | ECH |