Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1945 ATGCAAAAGTACAAGGTTAGGACAACGACAGGGCTTAGCCCTTCATGTGGAGCATGCAAGTTCCTCAGGAGAAAGTGTACTACTGACTGCATATTCGCTCCTTACTTCTCTTATGACCAGGCTGCAACCCATTTTGCAGCAGTGCACAAGGTTTTTGGTGCTAGTAATGTCTCTAGGTTACTGCTACACCTACCAGTGCAGACTAGGAGTGATGCTGCTGCCACCGTGTCTTATGAGGCGCTGGCTCGGATGCATGATCCTGTATATGGTTGTGTTGCTCAAGTCTTTGCCCTGCAGCAACAGGTTGCAAGCTTGCAAGAGGAAATAGATAAACTTGGTCATTTGATGGCCAACTCTCCTGTTTGTGCTGCCAATTCTGGTGGTGGCAGTTCTCAAGCCTCAACAAGCAGAAACATAGATGGGATAGAATTTTCTTGGCAGCAAGATGCAACAAATACGCAGCTTTATCATAATCAACTAGCTTCTTTACTTTCTCACCAAGGAAGTGTTGCGGCGTACCAAGGCTTGGAAGGACAGGTGAATTTGGATTTGCCAGATGCTCTTCAGTTGGAAGACCACTTATTTGATGAGTCCGACCTTAATTCATTGGAGAAGCTCCTATCAGGAATTGACCAACAGGTTTTCATCAATCATCCTTGA 660 0.4561 MQKYKVRTTTGLSPSCGACKFLRRKCTTDCIFAPYFSYDQAATHFAAVHKVFGASNVSRLLLHLPVQTRSDAAATVSYEALARMHDPVYGCVAQVFALQQQVASLQEEIDKLGHLMANSPVCAANSGGGSSQASTSRNIDGIEFSWQQDATNTQLYHNQLASLLSHQGSVAAYQGLEGQVNLDLPDALQLEDHLFDESDLNSLEKLLSGIDQQVFINHP 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1945 219 PANTHER LOB DOMAIN CONTAINING PROTEIN 13 153 - -
Prci2g1945 219 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
Prci2g1945 219 Pfam Lateral organ boundaries (LOB) domain 15 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1945 Prci-Chr2 14665467 14666660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1945 15 118 AS2 family AT5G06080 73.077 7.27e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci2g1945 LOB 1.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1945 K13945 - qsu:112039779 235.728