Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1927 ATGGCTGGGATATGCTGCGGTGTTGTTGGAGAAGGTGAGACCCCAACTCCAATTGAGCCGGGCCGACCCTCTCGGCGCCGGAGGTTGGATATAGTGCCTTTAAAACTCATGGCTGACATGGCCGTGCCGCTGCCCGAGACTAGCTTGAAGCGCCAGAAGCTGGATCTCTCTGCTAGTTCTCAGACGCAACCAAGAGACTGCGTAAACGCGGTGGAGAATTGTAAATCTAGCGGTGTTGAGAAGGAAGAAGAACAGAACGAGGAGGAACACAAAGGGGACGAAGCTCCGTCGAGGGTTTCTTCGTTAAATTCAAGTGCTACAAAAGAGTGTGATAATGAGAGTATTAACGAGTGTCCAAAGTTTGGGGTTACATCGGTTTGTGGTAGGAGGAGGGACATGGAAGATGCGGTTTCAGTTCGTCCTTCGTTCTGCCAAGAACAGGGTCAAAATCGGAATGAGCTTCACTACTTCGGTGTGTTCGACGGCCATGGTTGCTCTCATGTTGCGACGATCTGTAAGGATAGGTTGCATGATATTGTGAAGGAAGAGGTCGGTGGAGCGCGAGAGGATTTGGAATGGAAGTCTACGATGGAACAGAGTTTCGCTCGGATGGACGAGGAGGTGCAGAACTGGAGCCAGAGCAACCAGAACTCCACCTGCAGGTGCGAGCTTCAGACACCTCACTGCGACGCTGTTGGATCTACCGCGGTTGTTGCCGTTGTTACGCCGGATAAGGTCATCGTCTCCAACTGCGGCGACTCCCGCGCCGTTCTCTGCCGAAACGGCGTCGCCATCCCCCTCTCGTCCGATCACAAGCCCGACCGACCCGACGAGTTGCTCCGAGTTCAAGCCGCTGGAGGACGGGTCATTTACTGGGACGGTCCTAGGGTTCTCGGAGTCTTGGCAATGTCCAGAGCCATAGGCGATAATTATCTAAAACCGTACGTGATATCGGAGCCGGAGGTGACGGTGACGGAGCGGACAGACGAGGACGAGTGTTTGATACTTGCCAGTGACGGGCTGTGGGACGTGGTATCAAACGACACCGCATGCGGGGTCGTACGGATGTGCCTGAAGGTGCAGAAACCGCCGTCGCCTCCAAGATCGCCGGGAAGCGACGTGGCGGTGTACTCCGCCGTGGATGGTTCGGACAAGGCTTGCTCGGACGCATCCATCTTGCTGACTAAGCTAGCTCTGGCCCGGCATAGCACGGACAATGTGAGCGTGGTGGTGGTGGATTTGAGGAGAGAGAAACCAGGCGACGATGGGAACAATAATTAA 1281 0.5504 MAGICCGVVGEGETPTPIEPGRPSRRRRLDIVPLKLMADMAVPLPETSLKRQKLDLSASSQTQPRDCVNAVENCKSSGVEKEEEQNEEEHKGDEAPSRVSSLNSSATKECDNESINECPKFGVTSVCGRRRDMEDAVSVRPSFCQEQGQNRNELHYFGVFDGHGCSHVATICKDRLHDIVKEEVGGAREDLEWKSTMEQSFARMDEEVQNWSQSNQNSTCRCELQTPHCDAVGSTAVVAVVTPDKVIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTDEDECLILASDGLWDVVSNDTACGVVRMCLKVQKPPSPPRSPGSDVAVYSAVDGSDKACSDASILLTKLALARHSTDNVSVVVVDLRREKPGDDGNNN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1927 426 MobiDBLite consensus disorder prediction 77 109 - -
Prci2g1927 426 FunFam Protein phosphatase 2C 37 115 420 - -
Prci2g1927 426 PANTHER PROTEIN PHOSPHATASE 94 414 IPR015655 GO:0004722|GO:0006470
Prci2g1927 426 Gene3D - 114 420 IPR036457 -
Prci2g1927 426 MobiDBLite consensus disorder prediction 77 96 - -
Prci2g1927 426 ProSitePatterns PPM-type phosphatase domain signature. 156 164 IPR000222 GO:0043169
Prci2g1927 426 Pfam Protein phosphatase 2C 121 406 IPR001932 -
Prci2g1927 426 CDD PP2Cc 120 414 IPR001932 -
Prci2g1927 426 SUPERFAMILY PP2C-like 115 415 IPR036457 -
Prci2g1927 426 ProSiteProfiles PPM-type phosphatase domain profile. 120 414 IPR001932 -
Prci2g1927 426 SMART PP2C_4 108 412 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1927 Prci-Chr2 14528669 14530856 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1927 119 418 PP2C-type Phosphatase Gene Family AT1G07430 63.750 3.22e-144 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1927 K14497 - gmx:100776356 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1927 2 14528669 14530856 Prci2g1927 2 14528669 14530856 CCT
Prci2g1927 2 14528669 14530856 Prci2g1927 2 14528669 14530856 ECH