Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1905 ATGAAATGGTTTAGTAAGCTTTTCAAAGGTGGGTCCAGTCGAGGAAGGGGAGGTCGTCATCTCCGGCAGGCTACAGAGGAAAATTTGGTTTGGCGTAATCCGGCTAGATCGTTGGATGACCGTTCTCTAGCTGAAGATTTGAAGAGACCAAATGCTCGTCAAGGATATAGATTGGGGGGAGGCATCAATAAAGATTATGCAAGTGAATTTCAGGATAACCAAAACTCATCTGCACATCCTCCATACAGCCGTGCAACATATGGGGAAATTAGAATATGCGGTGGGTGCAAGCAGGAGGTAGACTATGCGAATTGTTTAACATGCAATGATACTCATTTTCATCCATGGTGCTTTCGCTGTCACTCTTGTCGCTACCCCATTACTGAGCATGAGTTTTCTTTATCAGGGAAGCATCCATATCACAAGTCCTGTTTCAAAGAGTTGACCCACCCAAAATGTGAAGTTTGCTACCAATTTATTCCTATAAATGCTGCTGGTTTGATCGAGTATAGGTGTCACCCATTTTGGTCCCAAAAATATTGTCCATCTCATGAATATGACGATACAGCTCGCTGCTGTAGTTGTGAAAGATTGGAGTCTTTGAATGCAAAATACTATAGCTTGGAAGATGGGCGGAGTTTATGTTTAGAGTGCATGGAGTCAGCTATTATGGACACTGGAGATTGTCAACCTCTTTACCATGATATTAGAGATTATTATGAAGGAATGTTTATGAAAATAGACCAACAAATTCCTATGCTTCTGGTTGAGAGGCAAGCACTCAATGAAGCTATTGTTGGGGATAAAAATGGTTACCATCACATGCCAGAGACAAGAGGCTTGTGCCTTTCTGAAGAGCTGACTGTCACCAGTATTCATCGGAGGCCAAGAATCGGAGGCCGCCAGCTATTTGGGATGAGAACCCAGCCTCAAAAGCTGACTAGAAAATGTGAGGTTACAGCCATTCTTGTTCTCTACGGTCTTCCAAGGTTGCTCACGGGCGCCATCCTTGTCCACGAGTTGATGCACGGCTGGTTACGCCTTAAAGGTTACCGTAATCTTAATCCTCACGTAGAGGAAGGAATCTGTCAGGTTCTGTCTTATATGTGGCTTGAGTCAGTGGTGATGCCTGGCCTTAAGAGCATGCCTTCAACTTCAGCAGCCTCCTCCTCCTCCTCCTCTTCCTACTACCCCTCCTCATCATCTAAGAAAGGAGCCAAGTCTGAAGTTGAGAATAAACTGGGTCAATTTTTCATGAATCAAATTGCCAATGATTCTTCTCCAGCGTATGGGGGTGGATTTAGAGCTGCTAATGAAGCTGTGAACAAATATGGTTTACATCGTACTCTTGATCATATTCGTTTGACTGGTAGTTTCCCACTGTAA 1386 0.4387 MKWFSKLFKGGSSRGRGGRHLRQATEENLVWRNPARSLDDRSLAEDLKRPNARQGYRLGGGINKDYASEFQDNQNSSAHPPYSRATYGEIRICGGCKQEVDYANCLTCNDTHFHPWCFRCHSCRYPITEHEFSLSGKHPYHKSCFKELTHPKCEVCYQFIPINAAGLIEYRCHPFWSQKYCPSHEYDDTARCCSCERLESLNAKYYSLEDGRSLCLECMESAIMDTGDCQPLYHDIRDYYEGMFMKIDQQIPMLLVERQALNEAIVGDKNGYHHMPETRGLCLSEELTVTSIHRRPRIGGRQLFGMRTQPQKLTRKCEVTAILVLYGLPRLLTGAILVHELMHGWLRLKGYRNLNPHVEEGICQVLSYMWLESVVMPGLKSMPSTSAASSSSSSSYYPSSSSKKGAKSEVENKLGQFFMNQIANDSSPAYGGGFRAANEAVNKYGLHRTLDHIRLTGSFPL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1905 461 MobiDBLite consensus disorder prediction 385 404 - -
Prci2g1905 461 CDD LIM_DA1 93 145 - -
Prci2g1905 461 Pfam LIM domain 93 146 IPR001781 -
Prci2g1905 461 Gene3D Cysteine Rich Protein 85 164 - -
Prci2g1905 461 PANTHER PROTEIN DA1-RELATED 2 3 460 IPR045218 -
Prci2g1905 461 ProSiteProfiles LIM domain profile. 91 151 IPR001781 -
Prci2g1905 461 Pfam Protein DA1 242 456 IPR022087 -
Prci2g1905 461 SMART lim_4 92 144 IPR001781 -
Prci2g1905 461 ProSitePatterns LIM zinc-binding domain signature. 93 127 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1905 Prci-Chr2 14372203 14377462 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci2g1905 DA1-like 9.8e-99 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1905 - - gmx:100784976 726.087