Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1897 ATGGACAGCATATCATCTGGTCCTCTGTTGTTGATTTCACTTCTTTGCTTTGCTTCTCTACTGCTAAAATGTCACTCTTCTTCCTCAGACGAGCCGAAGACTTACATTGTCTACACGGGGAACAGTAAGACTGATGAAGCTTCTGCATTGTCACAGTACACAAGCTTGCTGCAAAAAGTCTCTGATAGCGATGCTGTGCCCAAGTCAGTTCTCCATCACTACAAACGGAGTTTCAATGGCTTTGTTGCGAAGCTAACAGAGAAACAAGCAGAAACAATTGCAGGACTTGATGGTGTGGTCTCCGTGTTCCCCAGTCGAAAGAGACAACTCCACACAACAAGGTCTTGGGATTTCATTGGTTTCCCACTGAACGTGCAAAGAGCCACGACCGAAAGTGATATCATCATCGGAGTTCTCGATTCTGGAATCTGGCCTGAATCCGAAAGCTTCAGTGACAAGGGATTGGGCTCACCACCTAGGAAATGGAAGGGAACATGTCAATCCTCACCTAACTTCACTTGCAACAATAAAGTCATTGGGGCAAAGTATTACAGAGCTGATGGATCATTTGGTGATGAAGAGAAGTCTCCCAGAGACAATGATGGCCATGGGACTCATATATCATCAACCGTGGCTGGGAACCCAGTGAACCACGCAAGCATGTTAGGGCTGGCAACAGGAACAGCAAGAGGAGGTGCTGTATCAGCACGCATTGCTGTCTACAAAGTTTGCTGGATCGATGGTTGTTATGATGCAGACATTCTCGCAGCTTTTGATGATGCCATTGCTGATGGGGTGGATGTACTTTCAGTTTCTCTTGGAGGGCCAAATGACCAGAATTATTTCAGAGATGGACTAGCTATTGGAGCTTTCCATGCTATGAAAAATGGAATATTGACGGTAACTTCTGCTGGGAATTCTGGCCCAAAACCTGGATCACTCGTAAACTTTTCACCTTGGTCTATTTCCGTGGCTGCTAGCACCATTGATAGAAAGTTTCTTGCCAAGGTTGGTTTAGGTGATAACAGGACATTTGAGGGACTTTCTGTAAATACATTTGACCTTAAGGAACAACAGTACCCTATAATTTATGGAGGAGATGCACCGAATATTAGAGCAGGCTTTGATGGATCTTCATCCAGGTCTTGTGGGGAAGGTTCGTTGAATCCAAATTTAGTCAAGGGTAAAATTGTTCTGTGTGAAGGCAGAAGCAAAGCAGAAGGTGCCTTCGTGGCTAAAGCTATTGGTGCACTTACACAAGGTCAGAATTCCAGAGACTATGGCTGGTCTTTCCCCCTGCCTGCTTCGTACATTGACTTGCAGGATGCTAACAGCATTTTTGTCTACATGAATTCAACTAGGAATCCAACTGCAACCATATTTAGGACTAACGAGGAAAAAGATACATTGGCCCCTGTGGTGGCTTCTTTCTCCGCAAGGGGTCCTAGTCTTGTTTCCCCAGATATTCTCAAGCCGGATTTAGTGGCCCCGGGAGTCAACATTCTCGCTAGTTGGGCTTCAAATGCCTCTGTTTCTGAGGTTGACGGTGACAACAGAAGTTTGCAATTCAACATACTTTCAGGAACATCCATGTCATGTCCACATGTTTCTGGAGCTGCGGCTTTTGTTAAGTCATTCCATCCTGAATGGTCTCCTTCTGCTATTCAATCGGCTTTGATGACTACTGCTAGGACATTGAGTCCCAAGATTAACCGAGATGCAGAGTTTGCATATGGAGCAGGTCAAATCGATCCTGTAAAGGCAGTGAATCCTGGATTAGTATACGATGCTAGTGAAGCTGATTTTGTGAGATTCTTATGTGGACAGGGGTACACCACGAGGACATTACAGCTCGTAACAGGAGATAACAGCAGCTGCTCTAAAGCAGCTAAAGCAAGTGATTTAAACTACCCTTCATTTGCTCTTCCAACCCCTCCCTCCAACCTCACTGTGAGTGGTAGTTTTAAAAGAACTGTTACTTATGTTGGGTCGGAAAAGTCAACATACAAAGCCACTGTGAGTGGTCCTCCGGGGCTGAAAATCCAAGTGAACCCAAGTGTTCTTTCCTTCACTTCCTATGGTGAAAAGCAGAGCTTTGTGCTTAGCATTGAAGGAAGCTTGGAAGCATCTATAGTGTCAGCATCTTTGGTTTGGAGTGATGGTATGATCCCAGTGAGAAGCCCTATTGTTGTGTTCAATTCACCTCAATAG 2211 0.45 MDSISSGPLLLISLLCFASLLLKCHSSSSDEPKTYIVYTGNSKTDEASALSQYTSLLQKVSDSDAVPKSVLHHYKRSFNGFVAKLTEKQAETIAGLDGVVSVFPSRKRQLHTTRSWDFIGFPLNVQRATTESDIIIGVLDSGIWPESESFSDKGLGSPPRKWKGTCQSSPNFTCNNKVIGAKYYRADGSFGDEEKSPRDNDGHGTHISSTVAGNPVNHASMLGLATGTARGGAVSARIAVYKVCWIDGCYDADILAAFDDAIADGVDVLSVSLGGPNDQNYFRDGLAIGAFHAMKNGILTVTSAGNSGPKPGSLVNFSPWSISVAASTIDRKFLAKVGLGDNRTFEGLSVNTFDLKEQQYPIIYGGDAPNIRAGFDGSSSRSCGEGSLNPNLVKGKIVLCEGRSKAEGAFVAKAIGALTQGQNSRDYGWSFPLPASYIDLQDANSIFVYMNSTRNPTATIFRTNEEKDTLAPVVASFSARGPSLVSPDILKPDLVAPGVNILASWASNASVSEVDGDNRSLQFNILSGTSMSCPHVSGAAAFVKSFHPEWSPSAIQSALMTTARTLSPKINRDAEFAYGAGQIDPVKAVNPGLVYDASEADFVRFLCGQGYTTRTLQLVTGDNSSCSKAAKASDLNYPSFALPTPPSNLTVSGSFKRTVTYVGSEKSTYKATVSGPPGLKIQVNPSVLSFTSYGEKQSFVLSIEGSLEASIVSASLVWSDGMIPVRSPIVVFNSPQ 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1897 736 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 111 IPR037045 -
Prci2g1897 736 Pfam Fibronectin type-III domain 634 731 IPR041469 -
Prci2g1897 736 MobiDBLite consensus disorder prediction 190 211 - -
Prci2g1897 736 CDD PA_subtilisin_like 337 460 - -
Prci2g1897 736 FunFam Subtilisin-like protease SBT1.5 133 344 - -
Prci2g1897 736 ProSitePatterns Serine proteases, subtilase family, serine active site. 528 538 IPR023828 -
Prci2g1897 736 Gene3D Peptidase S8/S53 domain 133 602 IPR036852 GO:0004252|GO:0006508
Prci2g1897 736 Gene3D - 330 467 - -
Prci2g1897 736 SUPERFAMILY Subtilisin-like 110 593 IPR036852 GO:0004252|GO:0006508
Prci2g1897 736 Pfam Subtilase family 132 580 IPR000209 GO:0006508|GO:0008236
Prci2g1897 736 PRINTS Subtilisin serine protease family (S8) signature 527 543 IPR015500 -
Prci2g1897 736 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Prci2g1897 736 PRINTS Subtilisin serine protease family (S8) signature 199 212 IPR015500 -
Prci2g1897 736 ProSiteProfiles Serine proteases, subtilase domain profile. 115 589 - -
Prci2g1897 736 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 731 IPR045051 -
Prci2g1897 736 ProSitePatterns Serine proteases, subtilase family, histidine active site. 203 213 IPR022398 -
Prci2g1897 736 Gene3D - 606 733 - -
Prci2g1897 736 CDD Peptidases_S8_3 109 563 IPR034197 -
Prci2g1897 736 Pfam Peptidase inhibitor I9 34 111 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1897 Prci-Chr2 14296956 14301254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1897 31 732 Subtilisin-like Serine Gene Family AT5G59100 47.705 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1897 - - gmx:547512 1011.13