Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1896 ATGTCGAGACTTGATGGTGTGGTCTCCGTCTTCCCTAATCTAAAGAGACAGCTCCACACAACAAGGTCTTGGGATTTCATCGGTTTCCCACAGAACGTGCAAAGAGCCACGACAGAAAGTGATGTCATCATCGGAGTTCTTGACACTGGAATCTGGCCAGAATCCGAAAGCTTCAGTGATCAAGGATTAGGTCCACCACCTAAGAAATGGAAGGGAACTTGTCAATCCTCGTCTAACTTCACCTGCAATAGAAAAATCATTGGGGCAAGGTATTACAAATCTGATGGATCATTCAACGGTGAAGAAATGTCTCCAAGAGACTATGATGGTCATGGGACTCATGTAGCATCCACAGCAGCTGGAAACTCAGTTAGCCAGGCAAGCATGCTGGGGTTGGCAGCAGGAACAGCAAGAGGGGGTGTTGTATCAGCACGCATTTCTGTCTACAAAGTTTGTTGGTCCACTGGTTGTAATGATGCAGACATTCTCGCAGCTTTTGATGATGCCATTGCTGATGGGGTGGACATACTCTCAGTTTCTCTTGGAGGGTTGAATGATAAGAATTATTTCAGAAATGGAATAGCCATTGGAGCTTTTCATGCTAGGAGAAATGGAATATTAACGGTCACTTCTGCTGGGAATTCAGGACCCAGACTTGGATCACTGGGAAATTTTTCACCTTGGTCTATTTCTGTGGCTGCTAGTACCACGGATAGAAAGTTAGTTACAAACGTTGGATTAGGTGACAACAGAACATTTGAGGGAGTTTCAATAAATACATTTGACCTTAAGGAACAACAGTATCCCATAATTTATGGAGGAGACGCACCAAATACTCAAGCAGGCTTTGATGCATCTACATCCAGGTCTTGCAGTGCGGGTTCATTGGATCCAAATTTGGTGAAAGGCAAAATTGTTCTGTGTGAAGGCAGAAACAGAGCACTAGGTCCCTTCGTGGCAGAAGCTGTTGGTGCGATTACACAAGGTCAGAATTCCAGAGACCATGGCACGTCTTTCCCCTTACCTGCTTCGTACATTGACCTGCAAGATGCTAACAGTATTTTTGTCTACATCAATTCCACTAGGAATCCAACTGCAACCATATTTAAAACTAACGAGGAAAAGGATACATTGGCCCCTGTGGTGGTCTCTTTCTCGGCAAGGGGTCCTAGCCATGTTTCCCCAGAGATTCTCAAGCCGGATTTAGTGGCTCCGGGAGTCGACATTCTCGCTGGTTGGTCTCCAAAAGGCTCTATTTCTGGGGTTGGAGGCGACAACAGAAGTTTGCAGTTCAATATAATCTCAGGAACATCCTTGTCTTGTCCCCATGTTTCTGGGGCTGCCGCTTACGTCAAATCATTCCATCCTGAATGGTCTCCTTCCGCTGTTCAATCTGCTCTGATGACCACTGCAAGGCCATTGAGTCCCAGGTTTAACCGAGAAGCAGAATTTGCATATGGAGCAGGTCAAATCGATCCTATAAAGGCGGTCAATCCTGGTTTAGTATACGATGCCAGTGAAATAGACTTTGTGAGATTCTTATGTGGACAAGGGTACACCACAAGGACATTACAGCTTGTGACGGGGGATGATAGCAGCTGCTCTGGAGCAGCTAAAGCAAGTGATTTAAATTACCCTTCCTTTGCTCTTCCAACCCCTGCCTCCAACGTCACTGTAAGCGGCAGTTTTAGAAGAACTGTTACGCATGTGGGGTCAGAAAAGTCAACATACAACGCCACTGTGAGTGGTCCTCCTGGGCTGAAAATCCAGGTGAACCCAAGTGTTCTTTCCTTCACTTCTTATGGTGAAAAGCAGAGCTTTGTGGTGAGTGTTGAAGGAAGCTTGGAAGCATCTATAGTGTCAACATCTTTGGTTTGGAGTGACGGTAAGATCCAAGTGAGAAGCCCCATTGTCGTGTTCAATTCACCTCAATAG 1935 0.4574 MSRLDGVVSVFPNLKRQLHTTRSWDFIGFPQNVQRATTESDVIIGVLDTGIWPESESFSDQGLGPPPKKWKGTCQSSSNFTCNRKIIGARYYKSDGSFNGEEMSPRDYDGHGTHVASTAAGNSVSQASMLGLAAGTARGGVVSARISVYKVCWSTGCNDADILAAFDDAIADGVDILSVSLGGLNDKNYFRNGIAIGAFHARRNGILTVTSAGNSGPRLGSLGNFSPWSISVAASTTDRKLVTNVGLGDNRTFEGVSINTFDLKEQQYPIIYGGDAPNTQAGFDASTSRSCSAGSLDPNLVKGKIVLCEGRNRALGPFVAEAVGAITQGQNSRDHGTSFPLPASYIDLQDANSIFVYINSTRNPTATIFKTNEEKDTLAPVVVSFSARGPSHVSPEILKPDLVAPGVDILAGWSPKGSISGVGGDNRSLQFNIISGTSLSCPHVSGAAAYVKSFHPEWSPSAVQSALMTTARPLSPRFNREAEFAYGAGQIDPIKAVNPGLVYDASEIDFVRFLCGQGYTTRTLQLVTGDDSSCSGAAKASDLNYPSFALPTPASNVTVSGSFRRTVTHVGSEKSTYNATVSGPPGLKIQVNPSVLSFTSYGEKQSFVVSVEGSLEASIVSTSLVWSDGKIQVRSPIVVFNSPQ 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1896 644 Pfam Subtilase family 40 489 IPR000209 GO:0006508|GO:0008236
Prci2g1896 644 Pfam Fibronectin type-III domain 542 639 IPR041469 -
Prci2g1896 644 PRINTS Subtilisin serine protease family (S8) signature 39 58 IPR015500 -
Prci2g1896 644 PRINTS Subtilisin serine protease family (S8) signature 107 120 IPR015500 -
Prci2g1896 644 PRINTS Subtilisin serine protease family (S8) signature 435 451 IPR015500 -
Prci2g1896 644 ProSitePatterns Serine proteases, subtilase family, serine active site. 436 446 IPR023828 -
Prci2g1896 644 Gene3D - 238 375 - -
Prci2g1896 644 ProSiteProfiles Serine proteases, subtilase domain profile. 23 497 - -
Prci2g1896 644 FunFam Subtilisin-like protease SBT1.5 41 252 - -
Prci2g1896 644 Gene3D Peptidase S8/S53 domain 41 510 IPR036852 GO:0004252|GO:0006508
Prci2g1896 644 CDD Peptidases_S8_3 17 471 IPR034197 -
Prci2g1896 644 Gene3D - 514 641 - -
Prci2g1896 644 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 639 IPR045051 -
Prci2g1896 644 ProSitePatterns Serine proteases, subtilase family, histidine active site. 111 121 IPR022398 -
Prci2g1896 644 SUPERFAMILY Subtilisin-like 18 501 IPR036852 GO:0004252|GO:0006508
Prci2g1896 644 CDD PA_subtilisin_like 244 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1896 Prci-Chr2 14288735 14292653 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1896 1 640 Subtilisin-like Serine Gene Family AT5G59100 48.018 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1896 - - gmx:547512 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1896 2 14288735 14292653 Prci2g1896 2 14288735 14292653 CCT
Prci2g1898 2 14305198 14309006 Prci2g1896 2 14288735 14292653 CCT