LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2g1895	ATGAACTCAAGACTTACATTGTCTACACCGGTAAGACTGATGAAGCTTCTGCTTTGTCCCAGTACACAAACTTGCTGTAAAAAGCCTCTGAGAGGACTTGATGGTGTGGTCTCCGTCTTCCCTAATCTAAAGAGACAGCTCCACACAACAAGGTCTTGGGATTTCATCGGTTTCCCACAGAACGTGCAAAGAGCCACGACAGAAAGTGATGTCATCATCGGAGTTCTTGACACTGGAATCTGGCCAGAATCCGAAAGCTTCAGTGATCAAGGATTAGGTCCACCACCTAAGAAATGGAAGGGAACTTGTCAATCCTCGTCTAACTTCACCTGCAATAGAAAAATCATTGGGGCAAGGTATTACAAATCTGATGGATCATTCAACGGTGAAGAAATGTCTCCAAGAGACTATGATGGTCATGGGACTCATGTAGCATCCACAGCAGCTGGAAACTCAGTTAGCCAGGCAAGCATGCTGGGGTTGGCAGCAGGAACAGCAAGAGGGGGTGTTGTATCAGCACGCATTTCTGTCTACAAAGTTTGTTGGTCCACTGGTTGTAATGATGCAGACATTCTCGCAGCTTTTGATGATGCCATTGCTGATGGGGTGGACATACTCTCAGTTTCTCTTGGAGGGTTGAATGATAAGAATTATTTCAGAAATGGAATAGCCATTGGAGCTTTTCATGCTAGGAGAAATGGAATATTAACGGTCACTTCTGCTGGGAATTCAGGACCCAGACTTGGATCACTGGGAAATTTTTCACCTTGGTCTATTTCTGTGGCTGCTAGTACCACGGATAGAAAGTTAGTTACAAACGTTGGATTAGGTGACAACAGAACATTTGAGGGAGTTTCAATAAATACATTTGACCTTAAGGAACAACAGTATCCCATAATTTATGGAGGAGACGCACCAAATACTCAAGCAGGCTTTGATGCATCTACATCCAGGTCTTGCAGTGCGGGTTCATTGGATCCAAATTTGGTGAAAGGCAAAATTGTTCTGTGTGAAGGCAGAAACAGAGCACTAGGTCCCTTCGTGGCAGAAGCTGTTGGTGCGATTACACAAGGTCAGAATTCCAGAGACCATGGCACGTCTTTCCCCTTACCTGCTTCGTACATTGACCTGCAAGATGCTAACAGTATTTTTGTCTACATCAATTCCACTAGGAATCCAACTGCAACCATATTTAAAACTAACGAGGAAAAGGATACATTGGCCCCTGTGGTGGTCTCTTTCTCGGCAAGGGGTCCTAGCCATGTTTCCCCAGAGATTCTCAAGCCGGATTTAGTGGCTCCGGGAGTCGACATTCTCGCTGGTTGGTCTCCAAAAGGCTCTATTTCTGGGGTTGGAGGCGACAACAGAAGTTTGCAGTTCAATATAATCTCAGGAACATCCTTGTCTTGTCCCCATGTTTCTGGGGCTGCCGCTTACGTCAAATCATTCCATCCTGAATGGTCTCCTTCCGCTGTTCAATCTGCTCTGATGACCACTGCAAGGCCATTGAGTCCCAGGTTTAACCGAGAAGCAGAATTTGCATATGGAGCAGGTCAAATCGATCCTATAAAGGCGGTCAATCCTGGTTTAGTATACGATGCCAGTGAAATAGACTTTGTGAGATTCTTATGTGGACAAGGGTACACCACAAGGACATTACAGCTTGTGACGGGGGATGATAGCAGCTGCTCTGGAGCAGCTAAAGCAAGTGATTTAAATTACCCTTCCTTTGCTCTTCCAACCCCTGCCTCCAACGTCACTGTAAGCGGCAGTTTTAGAAGAACTGTTACGCATGTGGGGTCAGAAAAGTCAACATACAACGCCACTGTGAGTGGTCCTCCTGGGCTGAAAATCCAGGTGAACCCAAGTGTTCTTTCCTTCACTTCTTATGGTGAAAAGCAGAGCTTTGTGGTGAGTGTTGAAGGAAGCTTGGAAGCATCTATAGTGTCAACATCTTTGGTTTGGAGTGACGGTAAGATCCAAGTGAGAAGCCCCATTGTCGTGTTCAATTCACCTCAATAG	2022	0.456	MNSRLTLSTPVRLMKLLLCPSTQTCCKKPLRGLDGVVSVFPNLKRQLHTTRSWDFIGFPQNVQRATTESDVIIGVLDTGIWPESESFSDQGLGPPPKKWKGTCQSSSNFTCNRKIIGARYYKSDGSFNGEEMSPRDYDGHGTHVASTAAGNSVSQASMLGLAAGTARGGVVSARISVYKVCWSTGCNDADILAAFDDAIADGVDILSVSLGGLNDKNYFRNGIAIGAFHARRNGILTVTSAGNSGPRLGSLGNFSPWSISVAASTTDRKLVTNVGLGDNRTFEGVSINTFDLKEQQYPIIYGGDAPNTQAGFDASTSRSCSAGSLDPNLVKGKIVLCEGRNRALGPFVAEAVGAITQGQNSRDHGTSFPLPASYIDLQDANSIFVYINSTRNPTATIFKTNEEKDTLAPVVVSFSARGPSHVSPEILKPDLVAPGVDILAGWSPKGSISGVGGDNRSLQFNIISGTSLSCPHVSGAAAYVKSFHPEWSPSAVQSALMTTARPLSPRFNREAEFAYGAGQIDPIKAVNPGLVYDASEIDFVRFLCGQGYTTRTLQLVTGDDSSCSGAAKASDLNYPSFALPTPASNVTVSGSFRRTVTHVGSEKSTYNATVSGPPGLKIQVNPSVLSFTSYGEKQSFVVSVEGSLEASIVSTSLVWSDGKIQVRSPIVVFNSPQ	673

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci2g1895	673	Pfam	Fibronectin type-III domain	571	668	IPR041469	-
	Prci2g1895	673	SUPERFAMILY	Subtilisin-like	47	530	IPR036852	GO:0004252\|GO:0006508
	Prci2g1895	673	Gene3D	Peptidase S8/S53 domain	70	539	IPR036852	GO:0004252\|GO:0006508
	Prci2g1895	673	ProSiteProfiles	Serine proteases, subtilase domain profile.	52	526	-	-
	Prci2g1895	673	PRINTS	Subtilisin serine protease family (S8) signature	136	149	IPR015500	-
	Prci2g1895	673	PRINTS	Subtilisin serine protease family (S8) signature	464	480	IPR015500	-
	Prci2g1895	673	PRINTS	Subtilisin serine protease family (S8) signature	68	87	IPR015500	-
	Prci2g1895	673	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	140	150	IPR022398	-
	Prci2g1895	673	FunFam	Subtilisin-like protease SBT1.5	70	281	-	-
	Prci2g1895	673	Pfam	Subtilase family	69	518	IPR000209	GO:0006508\|GO:0008236
	Prci2g1895	673	Gene3D	-	267	404	-	-
	Prci2g1895	673	CDD	PA_subtilisin_like	273	397	-	-
	Prci2g1895	673	Gene3D	-	543	670	-	-
	Prci2g1895	673	CDD	Peptidases_S8_3	46	500	IPR034197	-
	Prci2g1895	673	ProSitePatterns	Serine proteases, subtilase family, serine active site.	465	475	IPR023828	-
	Prci2g1895	673	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	32	668	IPR045051	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci2g1895	Prci-Chr2	14288735	14292654	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci2g1895	27	669	Subtilisin-like Serine Gene Family	AT5G59100	48.255	0.0	606

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2g1895	-		-	gmx:547512	912.524