Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1893 ATGTTTTCTCTAAGCTCCTGGCGTCTCCTCTTCTCTCTCCTTTGCAGTCTTCTCGTTCTTCAGGCACATTGCGATGATCCTAAGGCACAGACTTATATCGTGTACATGGGGGATCATTGGAAGGAAATGAAAGTCGCTGAATTACATCACACGAGCATAGTTCAAAGAGTCCTTGGCAGAAACTTTGCCCGAGAAGCTCTGTTCCACAGCTACAAGAAGAGTTTCAACGGATTTGCGGTGAGGCTAACACAAGAGCAAGCTGAAAGAATGGCCGAAATGGATGGGGTGATCTCTGTTTTCCGAAGCGAAAAGCACAAGCTCCAAACAACGAGGTCCTTGGACTTCATAGGGTTCCCAAAGCAAGTGAAAAGAACAAGTTTCGAGAGTGACATCGTGGTCGAAGTAATCGATTTTGGAATTTGGCCCGAGGCTGACAGCTTCAACGACCATGGATTTACTTCGCCACCCAAAAAATGGAAAGGATCTTGCCAAAACATCACTTGCAATAACAAGATTATCGGAGCAAAATACTTTAGAGTGGATGGTACGTTCGACGAAGACGATATTATATCTCCAAGGGATTCAAATGGTCATGGAACTCACTGTGCATCCACAGCTGCAGGAAACTTGGTTAGCTCAGCGAATCTATTTGGTCTAGGTTCGGGCACAGCAAGAGGGGGAGTCCCTTCAGCGCGTATTGCTGTGTATAAACCTTGTTGGTCATCAGGTTGTGAATCCGCTGACATTCTGGCAGCATTTGACGAAGCAATCTATGATGGCGTTGACATACTTTCAGTATCACTTGGTCCTTCTAGGGAGATATACCGTGACTTCTTTGAGGACGTATATGCAATAGGATCTGTCCATGCAATGAAGAAAGGCATTCTAACCTCAAGTGCTGCCAATAACTTGGGTCCAAAGCTCCGGACCATGACTAGTTTTGCGCCCTGGTCGCTTCAAGTGGCTGCTTCCACTATTGATAGAAAGTTTTTCACCAAGGTTCAGCTGGGAAATGGCATGGTTTTTGAGGGAATCTCGTTGAACACCTTTGATCTTCACAACAAAACTTACCCGTTGATTTATTCTGGTGATGCACCCAATATCACCGGTGGATTTAACAGTTCCATATCAAGGTCTTGCATCGAAAACTCCTTGGACGAAGCAATGGTGAAGGGAAAAATAGTTTTGTGTGACAAGTATTTGCCTGCTCAAACGGGACTAGCATCTGGGGCGGCTGGGATTGTGGTTCCAGGCATTTCCTCCAAAGACTGGGCATCTTTGTTCACTCTTGCTCTTCCTCTTGCTGTGCTTACTCTAAACGATGGCACATCCATTTTCTCTTACTTGAATTCAAGCAGTAATCCAACTGCTACTATATATAAGAGTAATGAAGGCAAGGATTCTTTGTCCCCTTACGTGGCTTCCTTTTCTTCAAGGGGTCCAAATGTGATTACTCCCAACATTCTCAAGCCTGATATCGCTGCCCCGGGAGTAGATATCATAGCCGCATGGTCTCCCATTTCCCCTATTTCACATGCAAAAGGAGACGAGAGACTATCAAACTTCAATATTATATCAGGAACTTCCATGGCTTGCCCTCATGCTACTGCAGCAGCCGCCTATGTCAAGTCATTTCATCCCACGTGGTCTCCAGCAGCAATCAAGTCTGCCTTAATGACCTCCGCCACGCTAATGAGTTCCGCTCTCAATCCGGAAGCTGAATTTGCATATGGAGCTGGACAAATCAATCCCGTTAAGGCTGTGACTCCTGGTTTGGTATATGATATCAGTGAATCGGATTATGTGAGTTTCTTGTGCGGACAAGGTTATAATATGACAAGCCTACGAATCATTACAGATGATGTCGTCAACTGTGAAAAAGCTAAGAAGGAAACAGTGTGGGACCTGAATCTGCCATCTTTTGCTCTGAAGAGAAACATCTCAGCACCTTTTAGCAATGTGTTTCATAGAACTGTGACAAACTTTGGAGTAGCTGGATCTATATATAAGGCTAGAGTGATTGTTCCTCCATCTTTGTTGAGTATTCAAGTGACACCAAATGTTTTGTCGTTCTCATCTGTGGGTGAGAAGAAGTCGTTTACAGTTACAGTTGAAGGAAGAATAAATGTGGAAATAGTCTCCGCCTCTTTGATTTGGGATGATGGTAATTTCCAAGTGAGGAGCCCCATTGTGATTTACAGTACTCAGTGA 2211 0.445 MFSLSSWRLLFSLLCSLLVLQAHCDDPKAQTYIVYMGDHWKEMKVAELHHTSIVQRVLGRNFAREALFHSYKKSFNGFAVRLTQEQAERMAEMDGVISVFRSEKHKLQTTRSLDFIGFPKQVKRTSFESDIVVEVIDFGIWPEADSFNDHGFTSPPKKWKGSCQNITCNNKIIGAKYFRVDGTFDEDDIISPRDSNGHGTHCASTAAGNLVSSANLFGLGSGTARGGVPSARIAVYKPCWSSGCESADILAAFDEAIYDGVDILSVSLGPSREIYRDFFEDVYAIGSVHAMKKGILTSSAANNLGPKLRTMTSFAPWSLQVAASTIDRKFFTKVQLGNGMVFEGISLNTFDLHNKTYPLIYSGDAPNITGGFNSSISRSCIENSLDEAMVKGKIVLCDKYLPAQTGLASGAAGIVVPGISSKDWASLFTLALPLAVLTLNDGTSIFSYLNSSSNPTATIYKSNEGKDSLSPYVASFSSRGPNVITPNILKPDIAAPGVDIIAAWSPISPISHAKGDERLSNFNIISGTSMACPHATAAAAYVKSFHPTWSPAAIKSALMTSATLMSSALNPEAEFAYGAGQINPVKAVTPGLVYDISESDYVSFLCGQGYNMTSLRIITDDVVNCEKAKKETVWDLNLPSFALKRNISAPFSNVFHRTVTNFGVAGSIYKARVIVPPSLLSIQVTPNVLSFSSVGEKKSFTVTVEGRINVEIVSASLIWDDGNFQVRSPIVIYSTQ 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1893 736 Pfam Fibronectin type-III domain 635 732 IPR041469 -
Prci2g1893 736 FunFam Subtilisin-like protease SBT5.3 21 108 - -
Prci2g1893 736 SUPERFAMILY Subtilisin-like 107 592 IPR036852 GO:0004252|GO:0006508
Prci2g1893 736 Gene3D Peptidase S8/S53 domain 130 601 IPR036852 GO:0004252|GO:0006508
Prci2g1893 736 Gene3D - 327 466 - -
Prci2g1893 736 ProSitePatterns Serine proteases, subtilase family, serine active site. 527 537 IPR023828 -
Prci2g1893 736 Pfam Subtilase family 129 580 IPR000209 GO:0006508|GO:0008236
Prci2g1893 736 FunFam Subtilisin-like protease SBT1.5 130 338 - -
Prci2g1893 736 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Prci2g1893 736 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Prci2g1893 736 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Prci2g1893 736 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 731 IPR045051 -
Prci2g1893 736 Gene3D - 605 735 - -
Prci2g1893 736 CDD Peptidases_S8_3 105 563 IPR034197 -
Prci2g1893 736 ProSitePatterns Serine proteases, subtilase family, histidine active site. 198 208 IPR022398 -
Prci2g1893 736 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 108 IPR037045 -
Prci2g1893 736 CDD PA_subtilisin_like 334 459 - -
Prci2g1893 736 ProSiteProfiles Serine proteases, subtilase domain profile. 104 588 - -
Prci2g1893 736 Pfam Peptidase inhibitor I9 31 107 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1893 Prci-Chr2 14264633 14268006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1893 25 734 Subtilisin-like Serine Gene Family AT5G59100 46.888 0.0 626