Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1871 ATGGTGAAGGAACGCCAGGGAGAGCGGGTCAGGCTTTATGTCAGAGGTTCGATCCTTGGATACAAGAGGTCCAAGTCAAACCAATACCCAAACACATCACTCATCCAGATTGAGGGAGTAAACTCCAAGGAAGAAGTCGCATGGTACTGTGGCAAGCGCATGGCATACATCTACAAGGCCAAGGTGAAGAAGAATGGAAGCCACTATCGTTGTATTTGGGGGAAGGTTACCCGGCCTCATGGTAACAGTGGTATTGTTCGTGCCAAATTTAAGTCCAATTTGCCGCCCAGATCAATGGGAGCAAGGGTAAGAGTCTTCATGTATCCAAGCAATATATGA 339 0.4749 MVKERQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIEGVNSKEEVAWYCGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPRSMGARVRVFMYPSNI 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1871 112 SUPERFAMILY Translation proteins 12 106 IPR009000 -
Prci2g1871 112 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Prci2g1871 112 Gene3D translation elongation factor selb, chain A, domain 4 6 112 IPR038661 -
Prci2g1871 112 FunFam 60S ribosomal protein L35a 7 112 - -
Prci2g1871 112 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 112 IPR001780 GO:0003735|GO:0005840|GO:0006412
Prci2g1871 112 Pfam Ribosomal protein L35Ae 12 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Prci2g1871 112 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1871 Prci-Chr2 14040064 14042144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1871 1 112 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 89.286 4.86e-73 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1871 K02917 - nnu:104593384 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1871 2 14040064 14042144 Prci2g1871 2 14040064 14042144 ECH