Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g1856 | ATGGCGGCGAGCGAGCGCACCGTGTTGCAGTTCTCTTCCTCTTCGCAGAGTTTGTCTGCGAAGGTTCACCCTCTGGTCATCTTCAACATCTGCGACTGCTATGTCCGACGTCCGGACCAAGCGGAGCGCGTCATCGGAACTCTCCTGGGCTCTGTTTTGCCCGATGGAACCGTTGATATCCGTAATTCTTATGCTGTTCCCCACAATGAGTCACTGGGACAGGTTGCTTTGGATATTGAGTACCACCACAATATGTTGATATCCCACCAAAAAGTCAATCCAAAGGAAGTCATAGTTGGGTGGTACTCAACTGGTCTTGGAGTGAATGGGGGTAGTGCATTAATCCATGAATTTTATTCTAGAGAAGTGCCCAATCCTATTCATTTGACAGTTGATACGGGATTCACAAATGGAGAGGGAACCATAAAAGCATATGTATCGCACAATTTATCTCTTGGAGATTGGCAAATTGCTGCTCAGTTTCAAGAAATTCCTCTGGATCTTCGCATGGTTGAAGCTGAGCGAATTGGATTTGATACTTTGAAGGCAACTACTGTTGACAAAATCCCAAACGATTTGGAAGGGATGGAAACATCAATGGAACGTCTGCTAGCCTTGATTGATGACATCTACAAATATGTCGATGATGTTGTGGAAGGGCGTGTTGTGCCAGACAACAATGTCGGGAGGTTTATATCTAATGCTGTAGGTTCCCTTCTCAAATTGCCTCCTTCAGCTTTTGACAAGCTTGTGAACGATAGTTTGCAGGATCATTTGCTTTTGCTCTATTTATCAAGTATCACAAGGACACAACTGAGCTTGGCCGAGAAATTGAACACAGCTGCTCAGATTCTGTGA | 858 | 0.4499 | MAASERTVLQFSSSSQSLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYAVPHNESLGQVALDIEYHHNMLISHQKVNPKEVIVGWYSTGLGVNGGSALIHEFYSREVPNPIHLTVDTGFTNGEGTIKAYVSHNLSLGDWQIAAQFQEIPLDLRMVEAERIGFDTLKATTVDKIPNDLEGMETSMERLLALIDDIYKYVDDVVEGRVVPDNNVGRFISNAVGSLLKLPPSAFDKLVNDSLQDHLLLLYLSSITRTQLSLAEKLNTAAQIL | 285 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g1856 | 285 | Hamap | Eukaryotic translation initiation factor 3 subunit F [EIF3F]. | 18 | 281 | IPR027531 | GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Prci2g1856 | 285 | Pfam | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 18 | 122 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
Prci2g1856 | 285 | CDD | MPN_eIF3f | 21 | 278 | IPR027531 | GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Prci2g1856 | 285 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED | 12 | 282 | - | - | |
Prci2g1856 | 285 | Gene3D | Cytidine Deaminase, domain 2 | 7 | 186 | - | - | |
Prci2g1856 | 285 | SMART | pad1_6 | 19 | 150 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
Prci2g1856 | 285 | Pfam | Maintenance of mitochondrial structure and function | 172 | 278 | IPR024969 | - | |
Prci2g1856 | 285 | ProSiteProfiles | MPN domain profile. | 20 | 151 | IPR037518 | - | |
Prci2g1856 | 285 | FunFam | Eukaryotic translation initiation factor 3 subunit F | 8 | 186 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci2g1856 | Prci-Chr2 | 13806420 | 13809627 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci2g1856 | 2 | 285 | Eukaryotic Initiation Factors Gene Family | AT2G39990 | 77.663 | 4.29e-161 | 447 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g1856 | K03249 | - | gmx:100811797 | 465.692 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Prci2g1856 | 2 | 13806420 | 13809627 | Prci2g1856 | 2 | 13806420 | 13809627 | ECH |