Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1855 ATGGAGGGGAAGGAGCAGGACGTTTCGTTGGGAGCGAACAAGTTCCCGGAGAGACAGCCCATCGGGACGGCGGCACAGAGCCAGGACGATGGGAAGGACTACCAGGAGCCACCGCCGGCGCCTCTGTTCGAGCCATCCGAGCTCACGTCGTGGTCCTTCTACAGAGCCGGGATCGCCGAGTTCGTCGCTACTTTCCTCTTCCTCTACATCACCATCTTGACTGTTATGGGCGTCAGTCGTGCTGATGCCAACTCCAAGTGCAAAACCGTGGGAATTCAAGGAATCGCCTGGGCTTTCGGTGGCATGATCTTCGCACTCGTGTACTGCACAGCAGGAATTTCAGGTGGTCACATAAACCCAGCCGTGACGTTCGGGTTGTTCTTGGCAAGGAAGTTATCGTTGACAAGGGCACTGTTCTACATGGTGATGCAGTGCCTTGGTGCGATTTGCGGTGCGGGTGTGGTGAAGGGTTTTGAGGGAAAGAAACTATACGGGACCTTAGGGGGCGGTGTCAACTTTGTGCACGACGGTTATACCAAAGGAGATGGCCTCGGTGCTGAGATTGTTGGCACCTTCATTCTGGTCTACACCGTCTTCTCAGCTACTGATGCCAAGCGTAGCGCTCGAGACTCTCACGTCCCCATTTTGGCACCGTTGCCAATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCCACCATCCCCATCACCGGTACCGGTATCAACCCGGCTCGAAGTCTCGGAGCCGCCATCATCTTCAACAAACACGAAGGCTGGCATGAACACTGGATCTTCTGGGTGGGACCATTCATCGGAGCAGCGCTGGCAGCTCTGTACCACGTCGTGGTGATCAGAGCAATTCCATTCAAGTCCAAGTGA 876 0.5537 MEGKEQDVSLGANKFPERQPIGTAAQSQDDGKDYQEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVSRADANSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFEGKKLYGTLGGGVNFVHDGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKHEGWHEHWIFWVGPFIGAALAALYHVVVIRAIPFKSK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1855 291 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 287 IPR034294 -
Prci2g1855 291 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci2g1855 291 PRINTS Major intrinsic protein family signature 99 123 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci2g1855 291 PRINTS Major intrinsic protein family signature 186 204 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci2g1855 291 PRINTS Major intrinsic protein family signature 262 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci2g1855 291 PRINTS Major intrinsic protein family signature 222 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci2g1855 291 PRINTS Major intrinsic protein family signature 136 155 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci2g1855 291 SUPERFAMILY Aquaporin-like 47 283 IPR023271 -
Prci2g1855 291 ProSitePatterns MIP family signature. 117 125 IPR022357 -
Prci2g1855 291 Gene3D Glycerol uptake facilitator protein. 40 289 IPR023271 -
Prci2g1855 291 CDD MIP 55 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci2g1855 291 FunFam Probable aquaporin PIP1-2 40 291 - -
Prci2g1855 291 MobiDBLite consensus disorder prediction 1 39 - -
Prci2g1855 291 Pfam Major intrinsic protein 47 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci2g1855 291 NCBIfam MIP family channel protein 59 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1855 Prci-Chr2 13800387 13801936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1855 1 291 Major Intrinsic Protein MIP AT4G23400 84.880 1.71e-169 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1855 K09872 - gmx:100780145 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1855 2 13800387 13801936 Prci2g1855 2 13800387 13801936 CCT
Prci2g1855 2 13800387 13801936 Prci2g1855 2 13800387 13801936 ECH