Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1836 ATGGCTGCCACCGCCACCTCATACTTCTTCGGTACCCGTCTCACCACCAACAATATCGCCTCTGACTCCGGCAGATTCCACGCCCTGCTCAAGTTCGGCACCAAGAAGAAGGCCGCCCCGCCTCCTCCGCCCCCCAAAAAAAAGCCGTCCTTCAACACCAAACCATCTGGAGATCGGCTCGTGTGGTTCCCGGGTGCCAAACCGCCAGAATGGCTCGACGGAACCATGGTGGGAGACCGTGGGTTCGATCCATTTGGGCTAGGGAAGCCCGCTGAGTATTTGCAGTTCGACTTGGACTCGCTGGACCAGAATCTGGCTAAGAATGTGGCCGGGGACGTGATTGGAACCAGATTGGAGACCACGGAGGTTAAACCGACTCCGTTTCAGCCGTACACGGAGGTTTTCGGGTTGCAAAGGTTCCGCGAGTGTGAGCTGATTCATGGGAGGTGGGCAATGCTGGGAGCGCTCGGTGCCTTGGCCGTTGAGGCACTCACTGGAGTCGCATGGCAAGACGCTGGAAAGGTAGAGCTGGTGGAAGGATCATCCTATCTGGGGCTTCCTCTTCCATTCTCATTGACCACACTGATCTGGATCGAGGTGGTACTGATAGGCTACATTGAATTCCAAAGAAATGCAGAACTTGACCCAGAAAAAAGGTTATACCCAGGTGGCAAGTTCTTCGATCCCCTTGGCTTGGCCAACGACCCTGAAGAGAAGGCCAGGCTTCAACTTGCAGAGATCAAGCATTCCAGGTTAGCCATGGTGGTTTTCCTCATCTTTGCAATTCAAGCTGCTGTTACTGGCAAAGGGCCCATCGCTTTTATTGCTACCTTTAACAAGTGA 843 0.5421 MAATATSYFFGTRLTTNNIASDSGRFHALLKFGTKKKAAPPPPPPKKKPSFNTKPSGDRLVWFPGAKPPEWLDGTMVGDRGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGDVIGTRLETTEVKPTPFQPYTEVFGLQRFRECELIHGRWAMLGALGALAVEALTGVAWQDAGKVELVEGSSYLGLPLPFSLTTLIWIEVVLIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKARLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPIAFIATFNK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1836 280 SUPERFAMILY Chlorophyll a-b binding protein 56 277 - -
Prci2g1836 280 MobiDBLite consensus disorder prediction 34 58 - -
Prci2g1836 280 Pfam Chlorophyll A-B binding protein 68 264 IPR022796 -
Prci2g1836 280 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 31 276 IPR001344 GO:0009765|GO:0016020
Prci2g1836 280 Gene3D Chlorophyll a/b binding protein domain 61 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1836 Prci-Chr2 13622958 13625338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1836 9 277 Chloroplast and Mitochondria Gene Families AT3G08940 72.119 1.78e-136 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1836 K08915 - gmx:100794604 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1836 2 13622958 13625338 Prci2g1836 2 13622958 13625338 ECH