Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1835 ATGGCTTCTTTTCTCTTACTACTTTTCTTCGCCGCCGTCTTCACTGTTTTCCTCTTCCTCCTCCGGCGGAGCCGGTACCGGAGGCTCCACCTTCCCCCGGGGAGCTTGGGCCTGCCCTTCATCGGCGAGACTCTTCAGCTTATCTCAGCCTACAAGAGCGAGAACCCAGAGCCTTTTGTCGACAAGCGGGTGAACCGGTACGGCCCGATATTCACGACCCACATATTTGGGGAGCCGACGGTGTTCTCGGCGGACCCGGAGACGAACCGGTTCATTTTACTGAATGAGGGGAAGCTTTTCGATTGTAGCTATCCGGGTTCTATATCGAACCTCCTGGGCAAGCACTCGCTTCTGCTGATGAAAGGTGGTCTTCACAAGAGAATGCATTCGCTCACCATGAGCTTCGCTAACTCCACCATCATCAAGGATCATCTCTTGGTGGATATAGACCGGCTGATCCGGCTCAACCTGGATTCCTGGACCGATCGGGTCTTCCTCATGGAAGAGGCCAAGAAGATAACTTTCGAGCTGACGATGAAGCAGTTGATGAGCTTCGATCCGGGGGAGTGGACGGAGAGTCTGAGGAAGGAGTACGTGATGGTGATCGAAGGCTTCTTCACGCTGCCTCTGCCTCTGTTCTCCGCCACCTACCGGCGAGCCATCAGGGCCAGGACCAAGGTCGCCGAGGCCCTCACGCTCATTGTCAGGGACCGGAGGAAGGATAATCGCGTCAGATCCGATATGCTTGGAGCTCTCATGGCTTCCGGTGACCAGTTCTCCGACGAGCAGATCGTCGATTTCATGATCGCCTTGCTTGTTGCCGGCTATGAGACCACCTCCACCATCATGACCCTCGCCGTCAAGTTCCTCTCCGAAACTCCTCTGGCTCTGGCTCAGCTCAAGGAAGAACATGATCAGATCAGAGTGAAGAAGGGTGATGCAGAAGCTGCGGTGGAGTGGAGTGACTACAAGTCAATGGCATTTACTCAATGCGTTGTGAATGAGACTCTGCGAGTGGCTAACATAATCGGTGGGATTTTCAGGAGGGCCATGACAGACATCAACATAAAAGGTTATACAATTCCCAAGGGGTGGAAGGTGTTTGCATCATTCCGTGCTGTGCATCTAAACCCAGACCATTTCAAAGATGCTCGAACCTTCAATCCATGGAGGTGGCAGAATAATTCGGAAGCAGCAAGCCCAGGGAATGTATATACGCCATTTGGAGGAGGGCCAAGGCTGTGCCCTGGCTATGAGCTTGCTAGGGTTGTTCTCTCTGTCTTCCTTCACCGCATGATCACTCGTTTCAGTTGGGAAGCCGCGGAGGAGGACATTGTGTTTTTCCCAACAACGAGAACACAGAAGAGGTATCCAATCATAGTGAAGCGCCGAGAAGAGGCCCTACGACATTGTATATAG 1419 0.5307 MASFLLLLFFAAVFTVFLFLLRRSRYRRLHLPPGSLGLPFIGETLQLISAYKSENPEPFVDKRVNRYGPIFTTHIFGEPTVFSADPETNRFILLNEGKLFDCSYPGSISNLLGKHSLLLMKGGLHKRMHSLTMSFANSTIIKDHLLVDIDRLIRLNLDSWTDRVFLMEEAKKITFELTMKQLMSFDPGEWTESLRKEYVMVIEGFFTLPLPLFSATYRRAIRARTKVAEALTLIVRDRRKDNRVRSDMLGALMASGDQFSDEQIVDFMIALLVAGYETTSTIMTLAVKFLSETPLALAQLKEEHDQIRVKKGDAEAAVEWSDYKSMAFTQCVVNETLRVANIIGGIFRRAMTDINIKGYTIPKGWKVFASFRAVHLNPDHFKDARTFNPWRWQNNSEAASPGNVYTPFGGGPRLCPGYELARVVLSVFLHRMITRFSWEAAEEDKXVFFPTTRTQKRYPIIVKRREEALRHCI 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1835 473 Pfam Cytochrome P450 207 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g1835 473 PANTHER CYTOCHROME P450 26 28 447 - -
Prci2g1835 473 SUPERFAMILY Cytochrome P450 23 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g1835 473 PRINTS E-class P450 group I signature 415 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g1835 473 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g1835 473 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g1835 473 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g1835 473 PRINTS E-class P450 group I signature 370 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g1835 473 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g1835 473 PRINTS E-class P450 group I signature 405 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g1835 473 Coils Coil 297 317 - -
Prci2g1835 473 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g1835 473 PRINTS P450 superfamily signature 406 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g1835 473 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g1835 473 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g1835 473 CDD CYP90-like 63 464 - -
Prci2g1835 473 Gene3D Cytochrome P450 21 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci2g1835 473 FunFam Cytochrome P450 90A1 21 465 - -
Prci2g1835 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 408 417 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1835 Prci-Chr2 13583076 13587840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1835 120 468 Cytochrome P450 AT5G05690 77.337 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1835 K09588 - gmx:100781291 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1835 2 13583076 13587840 Prci2g1835 2 13583076 13587840 CCT
Prci2g1835 2 13583076 13587840 Prci2g1835 2 13583076 13587840 ECH