Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1827 ATGACGAATTCACTCCTCCCCCTCACCGTCTGCCTTGTCGCCGCCGTCACCCTCTTCTCTGCAATCCCCTTAATCCATGCTCTGGGTTCCGGCACTACTCTTGCCGTAACCGATGACTCCGGCACCGTCTGTGGCGTCGTGGCAGGAGAACTGACGCAGCGCATTGAATGCTACCGTCGCGGGCAGATCATGCCTGTTATTCCTAACGTTTCGTTTTCGTCGATTTCCGGGGGGAGGAGCTACTTCTGCGGCCTTAGGTCCGGTAACCACACTTTGCTCTGCTGGGACACTGTCTCTTCCAATTCCAGCGGTTCCTTCCAATGGAGGAGGCTTTACTCTAATTATAGTGGTCCGTTGGAGAATCTGGCGGTTGGACATACCCAAGTGTGCGCGACCGTCGTGGGTTCAGGCACCGTTCAGTGCTGGAGAACCAATGAGAGACCTGCGCCGGGTCAATTTGCGACAATAACATCCGGGTCTGGCTTTTCTTGCGGGATCTTGAAGAGTACTTATCGAGTTCGATGTTGGGGAATGCAACCCCTTGTGGATCGAATACTGAACGAATTCGGAGACATGCCCATGTTGAGTCTTGTAGCCGGCGATTCACATGTTTGTGGATTGAATTCGACAGGGTTTGTGGTTTGCGGAGGAAGTAACAGTTCCGGACAGCTTAGTGTTCCCCAAGGAGGACCCCTGGAATATTCTGGGTTGGCTCTCGGAGCTGAACATAGCTGCGCGATCAGACAATCGAATCGTTCGGTGGTTTGCTGGGGAGGCGGAGGGCAATTCTCGGTGAATGTAACAGCAGGAATATCTTTCGAGTTAATTGTTTCTGGGTCGAATTTTACTTGCGGATTAGTCTCCGGCAATTTTTCTGTGACGTGCTGGGGACCAGGTTGGGCTAATACTTCTGGTTCTGATCCACTCGAGCTTCCTTTACCTCCTATTCTCCCAGGGCCCTGTGTTCAATCTTCTTGTGAGTGTGGTCAATATCCTCAACATCAAAATCTGTGCTCTGGTTTTGGTACTATTTGCAGGCCTTGTTCTCCAAACATTACAGCCCCGGTTCTGCCGCCATCGCCTTCTCCGCCACCATTGGTTTCTCCTCCATCGTCTCGATCAAAGACATTGACAAGGGGTTTATTGGCATTCGCCATTGTTGGATCTGTTGGAGCATTTGCCGGTATCTGCACTATAATTTATTGCTTGTGGACTGGTGTTTGTTTTGGTAAGAAGAAAGTTCATAATTCCGTCCAACCCAGAATCACTAGAGAAGGTAGCTCTAATAATGGAGGTGCTGTAAATTCAAGCAATAGCCCGCCTTTGAGATCATCCACCATTAGACGTCAGGGCTCGAGGATAATGAGGCGCCAGAGGAGCGGGACTTCATCCACAAAACACCCTGATAGGGCAGAGGAATTCACTCTAACCGAGCTTATGGCAGCCACTAATAACTTCTCTCTTGAAAACAAGATTGGTGCTGGTAGCTTTGGTGTTGTGTACAAGGGCAAACTCGCAGATGGTCGTGAGGTGGCGATTAAGAGGGGTGAGATCGGTTCAAAGATGAAGAAGTTTCAAGAGAAAGAGAGTGCGTTTGAGTCAGAACTCGCATTCTTGTCCCGTTTACACCACAAACACTTGGTCAGGCTAGTTGGTTTCTGTGAGGAAAAAGATGAGAGGCTCTTGGTGTATGAATACATGAAGAATGGAGCATTGCATGATCATTTGCATGACAAGAACAATGTGGAAAAGGGTAGTAGTTTCTTGAATTCCTGGAAAATGAGGATCAAGATCGCGCTAGATGCTTCTCGAGGGATCGAATATCTCCATAACTATGCAGTCCCACCCATAATCCACAGGGACATCAAGTCTTCCAACATTCTTCTTGATGCCAATTGGACGGCGAGAGTGTCTGATTTCGGATTGTCATTGATGGGTCCAGACTCTGATCATGATTACCGGCCAACAAAGGCAGCAGGAACTGTAGGATACATTGATCCTGAGTACTATGGTCTGAATGTCTTGACAGCAAAGAGTGATGTCTATGGGTTTGGAATGGTACTGCTAGAACTCTTAACTGGAAAGAGAGCTATATTCAAGGATGGTGAAAATGGTGGCACCCCTGTGAGTTTGGTGGACTTTGCAGTGCCTGCAATAATAAACGATGAATTGCCTAAGATTCTGGACATGAGGGTCGGACCACCAGAGATGAACGAGGCAGAGGCGGTGGAGCTGGTGGCATATACAGCTAAGCACTGCGTGAATTTGGAAGGGAAGGACAGACCAACGATGACCGACATTGTGGCCAATCTGGAGAGGGCCTTGTCTCTTTGTGATAGTAGTCATGGCAGTATCTCCAGTGGCACAATCTCTATTGTTTCAGAATGA 2388 0.4866 MTNSLLPLTVCLVAAVTLFSAIPLIHALGSGTTLAVTDDSGTVCGVVAGELTQRIECYRRGQIMPVIPNVSFSSISGGRSYFCGLRSGNHTLLCWDTVSSNSSGSFQWRRLYSNYSGPLENLAVGHTQVCATVVGSGTVQCWRTNERPAPGQFATITSGSGFSCGILKSTYRVRCWGMQPLVDRILNEFGDMPMLSLVAGDSHVCGLNSTGFVVCGGSNSSGQLSVPQGGPLEYSGLALGAEHSCAIRQSNRSVVCWGGGGQFSVNVTAGISFELIVSGSNFTCGLVSGNFSVTCWGPGWANTSGSDPLELPLPPILPGPCVQSSCECGQYPQHQNLCSGFGTICRPCSPNITAPVLPPSPSPPPLVSPPSSRSKTLTRGLLAFAIVGSVGAFAGICTIIYCLWTGVCFGKKKVHNSVQPRITREGSSNNGGAVNSSNSPPLRSSTIRRQGSRIMRRQRSGTSSTKHPDRAEEFTLTELMAATNNFSLENKIGAGSFGVVYKGKLADGREVAIKRGEIGSKMKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALHDHLHDKNNVEKGSSFLNSWKMRIKIALDASRGIEYLHNYAVPPIIHRDIKSSNILLDANWTARVSDFGLSLMGPDSDHDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGFGMVLLELLTGKRAIFKDGENGGTPVSLVDFAVPAIINDELPKILDMRVGPPEMNEAEAVELVAYTAKHCVNLEGKDRPTMTDIVANLERALSLCDSSHGSISSGTISIVSE 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1827 795 Gene3D - 20 188 IPR009091 -
Prci2g1827 795 Gene3D - 189 338 IPR009091 -
Prci2g1827 795 CDD STKc_IRAK 492 773 - -
Prci2g1827 795 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 194 781 IPR044815 GO:0004674
Prci2g1827 795 MobiDBLite consensus disorder prediction 421 470 - -
Prci2g1827 795 Gene3D Transferase(Phosphotransferase) domain 1 567 784 - -
Prci2g1827 795 FunFam Serine/threonine-protein kinase-like protein CCR4 567 788 - -
Prci2g1827 795 FunFam serine/threonine-protein kinase-like protein CCR1 455 566 - -
Prci2g1827 795 Gene3D Phosphorylase Kinase; domain 1 447 566 - -
Prci2g1827 795 SUPERFAMILY RCC1/BLIP-II 27 262 IPR009091 -
Prci2g1827 795 SMART serkin_6 486 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1827 795 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Prci2g1827 795 ProSiteProfiles Protein kinase domain profile. 486 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1827 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Prci2g1827 795 SUPERFAMILY Protein kinase-like (PK-like) 463 771 IPR011009 -
Prci2g1827 795 Pfam Protein kinase domain 487 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1827 795 MobiDBLite consensus disorder prediction 421 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1827 Prci-Chr2 13479405 13482219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1827 3 795 Receptor kinase-like Gene Family AT3G55950 60.875 0.0 889
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Prci2g1827 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1827 - - gmx:100798905 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1827 2 13479405 13482219 Prci2g1827 2 13479405 13482219 CCT