LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2g1823	ATGGCTATCTCCGATGTCGACGCCGTCATCGAGTTCTTGAGGATCAATGGATTCTCAGAGGCTGAGTTTGCCCTCAAGCAGGACGTAGTCGAGAAAGCTGATCTGAGATCCTTTGACTACGAGAAATTCTTCTTCCCTATGGTTCCTCCGCTGCCGCCGGTCAGGGTCCGGTCGTTTAACCGGCTGTCCCCCACTGATTGCTCCTCGGAAGATGAGTTTGTGAGCTTGAGTTCTTCTACTTCTGATGTTTGTTCTTCTGAATTCGTCAATCCATATGGAATCCGTTCCTCATCTCGGAATGATTCTGAATCTTCATCTGATAGACAATCTCAATTTGGAACGGCACGAGATCACCATGAATTCGATATGCAAAATGAATCGTATTGGTGTAACGAGAAAGATGATGACAATTTCATGACTCCTAGCTTTGAAGGGCCAGATTTTTTTGGCTCTCCGACTGAGGACAAGTTCATAACCACATCAGAAATGGACAATCAACACGCGAATCTTCTGAGTCTTAGTTACATCTCTGAAGGACTTCAATCAGAGCAAAATGGTGATTGTATAGACAAGACTTGCCTTCCTAATAATCTCTTTGAAAGGGATCGAAGTGTTTCCTATTCTAAAGACCATTGTAGCGTGGGTGAGGAAGATCAGCTTGAATCAGGATTATTGGAAAAGGATATTCATCTGAATGCTATGAACCAAACGTTTGACTTTTACATAGGCAATAAAGATGCTTGGAAGGGGAACAAAGATTCTTATGACCTGACAATCGAAGTTGCTGAAATTAACAGCTTGGAAGCTCGAGACGATAGAGTTTTAACTGAAGAATATCTCGAATCAGATGGTGCTGCAGATGAAGCGGATATCACTGATGATGAACTGATCAAATACATTCCTGAGGATGACTATGAAGTATTTGAGCTAAGAATTATTCATAGAAAAAACAGGACTGGATTTGAAGAAAGCAAGGATCTTCCCATTGTACTGAATACAGTCATAGCTGGCAGATACTACATTACAGCTTATCTTGGTTCAGCAGCCTTCAGTAATGTTGTTCAGGCACATGATCTTCACATGGGAGTAGATGTTTGCTTGAAGATCATAAAAAATGATAAAGACTTCTTTGATCAAAGCTTAGATGAAATCAAACTTCTTAAACTTATCAATAAGCACGACCCAGCTGATCGATTCCATGTACTGCGTCTTTATGACTACTTCTATCACCAGGAACATCTGTTCATTGTTACTGAGCTTCTGCGAGCAAACTTATATGAATTTCAGAAATTCAACCAAGAATCTGGTGATGAAGCATATTTTACAATGAGCAGGTTGCAGTACATTACTCACCAGTGCTTGGAGGCATTGCAATACTTGCATAACTTGGGAATCATTCACTGTGACCTGAAGCCAGAAAATATTCTGATAAAAAGTTACAGAAGATGTGAGATCAAGGTCATTGATCTGGGAAGCAGTTGCTTTCACGCTGACAACTTGTGTCTATACGTGCAATCACGATCCTACAGGGCTCCTGAAGTGATGCTAGGCCTCCAATATGATGAAAAGATTGATATATGGTCCCTTGGCTGCATCTTAGCTGAACTTTGCTCTGGTGAAGTATGTTCTAACATTGCTTGCATTTGA	1647	0.4098	MAISDVDAVIEFLRINGFSEAEFALKQDVVEKADLRSFDYEKFFFPMVPPLPPVRVRSFNRLSPTDCSSEDEFVSLSSSTSDVCSSEFVNPYGIRSSSRNDSESSSDRQSQFGTARDHHEFDMQNESYWCNEKDDDNFMTPSFEGPDFFGSPTEDKFITTSEMDNQHANLLSLSYISEGLQSEQNGDCIDKTCLPNNLFERDRSVSYSKDHCSVGEEDQLESGLLEKDIHLNAMNQTFDFYIGNKDAWKGNKDSYDLTIEVAEINSLEARDDRVLTEEYLESDGAADEADITDDELIKYIPEDDYEVFELRIIHRKNRTGFEESKDLPIVLNTVIAGRYYITAYLGSAAFSNVVQAHDLHMGVDVCLKIIKNDKDFFDQSLDEIKLLKLINKHDPADRFHVLRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGDEAYFTMSRLQYITHQCLEALQYLHNLGIIHCDLKPENILIKSYRRCEIKVIDLGSSCFHADNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVCSNIACI	548

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Prci2g1823	548	MobiDBLite	consensus disorder prediction	95	111	-	-
Prci2g1823	548	Gene3D	Phosphorylase Kinase; domain 1	334	420	-	-
Prci2g1823	548	CDD	PKc_DYRK_like	339	541	-	-
Prci2g1823	548	ProSiteProfiles	Protein kinase domain profile.	339	548	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Prci2g1823	548	SUPERFAMILY	Protein kinase-like (PK-like)	328	541	IPR011009	-
Prci2g1823	548	FunFam	Putative serine/threonine-protein kinase dyrk2	333	420	-	-
Prci2g1823	548	SMART	serkin_6	339	548	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Prci2g1823	548	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	465	477	IPR008271	GO:0004672\|GO:0006468
Prci2g1823	548	MobiDBLite	consensus disorder prediction	95	117	-	-
Prci2g1823	548	Gene3D	Transferase(Phosphotransferase) domain 1	393	541	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci2g1823	Prci-Chr2	13452921	13455795	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci2g1823	336	540	MAP Kinase Gene Family	AT5G19010	33.184	3.92e-25	107

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_DYRK-PRP4	Prci2g1823		Pkinase	1.1e-40	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2g1823	-		-	pcin:129298853	1056.2

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Prci2g1823	2	13452921	13455795	Prci2g1823	2	13452921	13455795	ECH

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