Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1823 ATGGCTATCTCCGATGTCGACGCCGTCATCGAGTTCTTGAGGATCAATGGATTCTCAGAGGCTGAGTTTGCCCTCAAGCAGGACGTAGTCGAGAAAGCTGATCTGAGATCCTTTGACTACGAGAAATTCTTCTTCCCTATGGTTCCTCCGCTGCCGCCGGTCAGGGTCCGGTCGTTTAACCGGCTGTCCCCCACTGATTGCTCCTCGGAAGATGAGTTTGTGAGCTTGAGTTCTTCTACTTCTGATGTTTGTTCTTCTGAATTCGTCAATCCATATGGAATCCGTTCCTCATCTCGGAATGATTCTGAATCTTCATCTGATAGACAATCTCAATTTGGAACGGCACGAGATCACCATGAATTCGATATGCAAAATGAATCGTATTGGTGTAACGAGAAAGATGATGACAATTTCATGACTCCTAGCTTTGAAGGGCCAGATTTTTTTGGCTCTCCGACTGAGGACAAGTTCATAACCACATCAGAAATGGACAATCAACACGCGAATCTTCTGAGTCTTAGTTACATCTCTGAAGGACTTCAATCAGAGCAAAATGGTGATTGTATAGACAAGACTTGCCTTCCTAATAATCTCTTTGAAAGGGATCGAAGTGTTTCCTATTCTAAAGACCATTGTAGCGTGGGTGAGGAAGATCAGCTTGAATCAGGATTATTGGAAAAGGATATTCATCTGAATGCTATGAACCAAACGTTTGACTTTTACATAGGCAATAAAGATGCTTGGAAGGGGAACAAAGATTCTTATGACCTGACAATCGAAGTTGCTGAAATTAACAGCTTGGAAGCTCGAGACGATAGAGTTTTAACTGAAGAATATCTCGAATCAGATGGTGCTGCAGATGAAGCGGATATCACTGATGATGAACTGATCAAATACATTCCTGAGGATGACTATGAAGTATTTGAGCTAAGAATTATTCATAGAAAAAACAGGACTGGATTTGAAGAAAGCAAGGATCTTCCCATTGTACTGAATACAGTCATAGCTGGCAGATACTACATTACAGCTTATCTTGGTTCAGCAGCCTTCAGTAATGTTGTTCAGGCACATGATCTTCACATGGGAGTAGATGTTTGCTTGAAGATCATAAAAAATGATAAAGACTTCTTTGATCAAAGCTTAGATGAAATCAAACTTCTTAAACTTATCAATAAGCACGACCCAGCTGATCGATTCCATGTACTGCGTCTTTATGACTACTTCTATCACCAGGAACATCTGTTCATTGTTACTGAGCTTCTGCGAGCAAACTTATATGAATTTCAGAAATTCAACCAAGAATCTGGTGATGAAGCATATTTTACAATGAGCAGGTTGCAGTACATTACTCACCAGTGCTTGGAGGCATTGCAATACTTGCATAACTTGGGAATCATTCACTGTGACCTGAAGCCAGAAAATATTCTGATAAAAAGTTACAGAAGATGTGAGATCAAGGTCATTGATCTGGGAAGCAGTTGCTTTCACGCTGACAACTTGTGTCTATACGTGCAATCACGATCCTACAGGGCTCCTGAAGTGATGCTAGGCCTCCAATATGATGAAAAGATTGATATATGGTCCCTTGGCTGCATCTTAGCTGAACTTTGCTCTGGTGAAGTATGTTCTAACATTGCTTGCATTTGA 1647 0.4098 MAISDVDAVIEFLRINGFSEAEFALKQDVVEKADLRSFDYEKFFFPMVPPLPPVRVRSFNRLSPTDCSSEDEFVSLSSSTSDVCSSEFVNPYGIRSSSRNDSESSSDRQSQFGTARDHHEFDMQNESYWCNEKDDDNFMTPSFEGPDFFGSPTEDKFITTSEMDNQHANLLSLSYISEGLQSEQNGDCIDKTCLPNNLFERDRSVSYSKDHCSVGEEDQLESGLLEKDIHLNAMNQTFDFYIGNKDAWKGNKDSYDLTIEVAEINSLEARDDRVLTEEYLESDGAADEADITDDELIKYIPEDDYEVFELRIIHRKNRTGFEESKDLPIVLNTVIAGRYYITAYLGSAAFSNVVQAHDLHMGVDVCLKIIKNDKDFFDQSLDEIKLLKLINKHDPADRFHVLRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGDEAYFTMSRLQYITHQCLEALQYLHNLGIIHCDLKPENILIKSYRRCEIKVIDLGSSCFHADNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVCSNIACI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1823 548 MobiDBLite consensus disorder prediction 95 111 - -
Prci2g1823 548 Gene3D Phosphorylase Kinase; domain 1 334 420 - -
Prci2g1823 548 CDD PKc_DYRK_like 339 541 - -
Prci2g1823 548 ProSiteProfiles Protein kinase domain profile. 339 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1823 548 SUPERFAMILY Protein kinase-like (PK-like) 328 541 IPR011009 -
Prci2g1823 548 FunFam Putative serine/threonine-protein kinase dyrk2 333 420 - -
Prci2g1823 548 SMART serkin_6 339 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1823 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Prci2g1823 548 MobiDBLite consensus disorder prediction 95 117 - -
Prci2g1823 548 Gene3D Transferase(Phosphotransferase) domain 1 393 541 - -
Prci2g1823 548 Pfam Protein kinase domain 343 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1823 548 PANTHER DUAL SPECIFICITY PROTEIN KINASE 96 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1823 Prci-Chr2 13452921 13455795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1823 336 540 MAP Kinase Gene Family AT5G19010 33.184 3.92e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Prci2g1823 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1823 - - pcin:129298853 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1823 2 13452921 13455795 Prci2g1823 2 13452921 13455795 ECH