Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1822 ATGGCTATCTCCGATGTCGACGCCGTCATCGAGTTCTTGAGGATCAATGGATTCTCAGAGGCTGAGTTTGCCCTCAAGCAGGACGTAGTCGAGAAAGCTGATCTGAGATCCTTTGACTACGAGAAATTCTTCTTCCCTATGGTTCCTCCGCTGCCGCCGGTCAGGGTCCGGTCGTTTAACCGGCTGTCCCCCACTGATTGCTCCTCGGAAGATGAGTTTGTGAGCTTGAGTTCTTCTACTTCTGATGTTTGTTCTTCTGAATTCGTCAATCCATATGGAATCCGTTCCTCATCTCGGAATGATTCTGAATCTTCATCTGATAGACAATCTCAATTTGGAACGGCACGAGATCACCATGAATTCGATATGCAAAATGAATCGTATTGGTGTAACGAGAAAGATGATGACAATTTCATGACTCCTAGCTTTGAAGGGCCAGATTTTTTTGGCTCTCCGACTGAGGACAAGTTCATAACCACATCAGAAATGGACAATCAACACGCGAATCTTCTGAGTCTTAGTTACATCTCTGAAGGACTTCAATCAGAGCAAAATGGTGATTGTATAGACAAGACTTGCCTTCCTAATAATCTCTTTGAAAGGGATCGAAGTGTTTCCTATTCTAAAGACCATTGTAGCGTGGGTGAGGAAGATCAGCTTGAATCAGGATTATTGGAAAAGGATATTCATCTGAATGCTATGAACCAAACGTTTGACTTTTACATAGGCAATAAAGATGCTTGGAAGGGGAACAAAGATTCTTATGACCTGACAATCGAAGTTGCTGAAATTAACAGCTTGGAAGCTCGAGACGATAGAGTTTTAACTGAAGAATATCTCGAATCAGATGGTGCTGCAGATGAAGCGGATATCACTGATGATGAACTGATCAAATACATTCCTGAGGATGACTATGAAGTATTTGAGCTAAGAATTATTCATAGAAAAAACAGGACTGGATTTGAAGAAAGCAAGGATCTTCCCATTGTACTGAATACAGTCATAGCTGGCAGATACTACATTACAGCTTATCTTGGTTCAGCAGCCTTCAGTAATGTTGTTCAGGCACATGATCTTCACATGGGAGTAGATGTTTGCTTGAAGATCATAAAAAATGATAAAGACTTCTTTGATCAAAGCTTAGATGAAATCAAACTTCTTAAACTTATCAATAAGCACGACCCAGCTGATCGATTCCATGTACTGCGTCTTTATGACTACTTCTATCACCAGGAACATCTGTTCATTGTTACTGAGCTTCTGCGAGCAAACTTATATGAATTTCAGAAATTCAACCAAGAATCTGGTGATGAAGCATATTTTACAATGAGCAGGTTGCAGTACATTACTCACCAGTGCTTGGAGGCATTGCAATACTTGCATAACTTGGGAATCATTCACTGTGACCTGAAGCCAGAAAATATTCTGATAAAAAGTTACAGAAGATGTGAGATCAAGGTCATTGATCTGGGAAGCAGTTGCTTTCACGCTGACAACTTGTGTCTATACGTGCAATCACGATCCTACAGGGCTCCTGAAGTGATGCTAGGCCTCCAATATGATGAAAAGATTGATATATGGTCCCTTGGCTGCATCTTAGCTGAACTTTGCTCTGGTGAAGTTCTCTTTCCAAACGACGCAGTTGTCATGATTCTAGCACGAATGATTGGAATGCTTGGTCCTATTGATCTTGAGATGTTGGTCAAAGGACAGGAAACTCACAAGTACTTCACCAAGGAATTTGATATTTATTATGTCAATGAGGAGACAGATAAAGTTGAGCATATAATTCCAGAAGAGTCATCATTGGAGCAGCACTTGCAGGTTACAGATGCTTTGTTCATAGACTTTGTAAGATACTTGCTTAGCATAAACCCTAAAACAAGACCTACTGCAGCACAGGCGTTAAGACACCCATGGCTTTCCTATGCCTATAAGTCCAAGGACAAGAATGTTCATTAA 1962 0.4088 MAISDVDAVIEFLRINGFSEAEFALKQDVVEKADLRSFDYEKFFFPMVPPLPPVRVRSFNRLSPTDCSSEDEFVSLSSSTSDVCSSEFVNPYGIRSSSRNDSESSSDRQSQFGTARDHHEFDMQNESYWCNEKDDDNFMTPSFEGPDFFGSPTEDKFITTSEMDNQHANLLSLSYISEGLQSEQNGDCIDKTCLPNNLFERDRSVSYSKDHCSVGEEDQLESGLLEKDIHLNAMNQTFDFYIGNKDAWKGNKDSYDLTIEVAEINSLEARDDRVLTEEYLESDGAADEADITDDELIKYIPEDDYEVFELRIIHRKNRTGFEESKDLPIVLNTVIAGRYYITAYLGSAAFSNVVQAHDLHMGVDVCLKIIKNDKDFFDQSLDEIKLLKLINKHDPADRFHVLRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGDEAYFTMSRLQYITHQCLEALQYLHNLGIIHCDLKPENILIKSYRRCEIKVIDLGSSCFHADNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMLGPIDLEMLVKGQETHKYFTKEFDIYYVNEETDKVEHIIPEESSLEQHLQVTDALFIDFVRYLLSINPKTRPTAAQALRHPWLSYAYKSKDKNVH 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1822 653 PANTHER DUAL SPECIFICITY PROTEIN KINASE 96 642 - -
Prci2g1822 653 MobiDBLite consensus disorder prediction 95 111 - -
Prci2g1822 653 ProSiteProfiles Protein kinase domain profile. 339 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1822 653 Gene3D Transferase(Phosphotransferase) domain 1 393 641 - -
Prci2g1822 653 CDD PKc_DYRK_like 339 641 - -
Prci2g1822 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Prci2g1822 653 MobiDBLite consensus disorder prediction 95 117 - -
Prci2g1822 653 SMART serkin_6 339 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1822 653 Gene3D Phosphorylase Kinase; domain 1 334 420 - -
Prci2g1822 653 Pfam Protein kinase domain 343 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1822 653 SUPERFAMILY Protein kinase-like (PK-like) 328 645 IPR011009 -
Prci2g1822 653 FunFam Putative serine/threonine-protein kinase dyrk2 333 420 - -
Prci2g1822 653 FunFam Serine/threonine-protein kinase ppk15 418 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1822 Prci-Chr2 13452921 13456283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1822 336 636 MAP Kinase Gene Family AT5G19010 31.776 1.61e-34 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Prci2g1822 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1822 - - pcin:129298853 1281.16