Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1809 ATGGGTCCTCACCTCAACAACGTCGCTTCCGATCGGGTCAAGGGCTCTTGGAGCCCCAAGGAGGATGCCACTCTCATCAAGCTCGTCCACCACCACGGCCCTCGCAATTGGTCTCTCATCAGCCTCGGCATTCCGGGACGGTCCGGAAAGTCTTGCAGGCTCCGATGGTGCAATCAGCTCAGCCCAGGCGTACAGCACCGTCCTTTTACTCCCGCCGAGGATGCCGTCATCGTCCAGGCTCACGCCGTCCACGGTAACAAGTGGGCTACCATCGCCCGTCTCTTGCCAGGACGAACGGACAACTCCATCAGAACCACTGGAACTCCACACTGCGCCGCCGCCGAGCGGCGGAGATGTCTTATGTGTCCGGATCGTCAGAGGCGGACTCTACTGTGGTAA 399 0.6065 MGPHLNNVASDRVKGSWSPKEDATLIKLVHHHGPRNWSLISLGIPGRSGKSCRLRWCNQLSPGVQHRPFTPAEDAVIVQAHAVHGNKWATIARLLPGRTDNSIRTTGTPHCAAAERRRCLMCPDRQRRTLLW 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1809 132 Gene3D - 68 106 - -
Prci2g1809 132 ProSiteProfiles Myb-like domain profile. 61 104 IPR001005 -
Prci2g1809 132 FunFam MYB transcription factor 14 65 - -
Prci2g1809 132 SUPERFAMILY Homeodomain-like 11 104 IPR009057 -
Prci2g1809 132 CDD SANT 68 104 IPR001005 -
Prci2g1809 132 Pfam Myb-like DNA-binding domain 14 60 IPR001005 -
Prci2g1809 132 Pfam Myb-like DNA-binding domain 68 104 IPR001005 -
Prci2g1809 132 SMART sant 65 117 IPR001005 -
Prci2g1809 132 SMART sant 13 62 IPR001005 -
Prci2g1809 132 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 104 IPR017930 -
Prci2g1809 132 Gene3D - 13 65 - -
Prci2g1809 132 PANTHER MYB PROTEIN-RELATED 14 104 - -
Prci2g1809 132 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Prci2g1809 132 CDD SANT 16 58 IPR001005 -
Prci2g1809 132 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1809 Prci-Chr2 13268095 13269025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1809 11 119 MYB Transcription Factor Family AT2G23290 66.055 3.12e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci2g1809 Myb_DNA-binding 1.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1809 - - pcin:129302547 286.189