Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1808 ATGACAAGCCAGCAAGACGCTCAGGTGTTCAATTGGCACTACACGGAGCTGGATAACCATAACCTCGAGGTCCGCAGCAGAAAAGTCTTGTTCATCGTCTTTCTTTTCTGTTTGATCTTTCTAGTTATTCTTCTCTTCCTCTGCGCTCGATGGATCTGCCGGTACCGGGACCACCTTCCCACTACCTTCCACTCCAGTCAGGTGCGTCACGCGGCCCCTCCGCCGTCGCAAGGTCTCGACCTTGATTCGATCAAGAAATTGCCGATAATCTTGCACCAGGCGCCGTCGGACTCCGATTGCGCATTGGAGGAAACAGACTGCTGTATTTGCCTTAGCATGTTCGAAGATGGCGAGAAATTGAAGGTCTTGCCCGGATGCAGTCATTGTTTCCATTGTCAGTGTGTCGATAACTGGCTTATTAATCACTCCAGTTGCCCACTCTGCAGAGCTTCTATTCAAGTTGATGTTGATTCGTCGTTTCCAGAGATTTTGATTCAGGAACCACCAATTAGAATCGACCTTCAATTCTAG 531 0.4896 MTSQQDAQVFNWHYTELDNHNLEVRSRKVLFIVFLFCLIFLVILLFLCARWICRYRDHLPTTFHSSQVRHAAPPPSQGLDLDSIKKLPIILHQAPSDSDCALEETDCCICLSMFEDGEKLKVLPGCSHCFHCQCVDNWLINHSSCPLCRASIQVDVDSSFPEILIQEPPIRIDLQF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1808 176 SUPERFAMILY RING/U-box 100 155 - -
Prci2g1808 176 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 25 159 - -
Prci2g1808 176 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 155 IPR013083 -
Prci2g1808 176 Pfam Ring finger domain 106 149 IPR001841 -
Prci2g1808 176 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Prci2g1808 176 SMART ring_2 107 148 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1808 Prci-Chr2 13264934 13265815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1808 3 158 C3H Transcription Factor Family AT3G11110 39.744 6.70e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1808 - - gmx:100803278 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1808 2 13264934 13265815 Prci2g1808 2 13264934 13265815 CCT