Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1807 ATGGGCGACCCTTCATCCCCACCTCCGTCTCACTCCCCTGAAGCCGCCGCCGACACACCCACTGATCCTTCTTCTAGCAAAACCAAACCCAAAGGTGGTCCCGACAACAATAAGTTTAGGTTCCGCGGTGTCAGGCAGCGAAGCTGGGGCAAATGGGTCGCCGAGATCCGCGAGCCTCGCAAGCGTAGCCGCAAGTGGCTCGGCACTTTCGCCACCGCCGAAGACGCCGCCCGAGCCTACGACCGCGCTGCCCTCATCCTGTACGGCTCCAGGGCCCAGCTCAACCTCCAGCCCTCTCCATCGTCCTCCTCCTCCTCCTCCTCCGCCTCCGCCTCCTCTCGCCCATCTAATTCTTCCTCTGCTCAGACCCTCCGCCCCTTGCTCCCCCGTCCCCCCGCCACCTCCGCCTTCTTGCCCTACGGGCTTTATAATACTCAGTTTCTCTGCCCTGTCAACAACGCACTGCAAGGGCAACATCATCCCCAGAAAGTGGTGCAGTTATATGGGTCCCCGAAGTCCGATGGTGGAAATTATACTGCTAATCTCGATGACTCCACTATAGCAGCAACCTTGTACCAAAACCATAGTCGCCATGATCTGCATGCGTCAAATCAGGAGAAGAATAGTCGGCAGAGTGATTGCATGTACGATAATACAAGCTCCATGGTAGGATCAGGCTTGAGTTCTTCTTCCCAGACTATAATTACGCCGCAGACGGCCGCTCTGGATCCGCCAGTAGCGGCGGGAGCAGTTAGTGTGGGATCGCCGTCTATGTGGCCGATGTCAAATGAGGAGGAGTACCCGTCTATTCTGTGGGACTATAATGATCCTTTCTTCTTTGATTTTTGA 849 0.563 MGDPSSPPPSHSPEAAADTPTDPSSSKTKPKGGPDNNKFRFRGVRQRSWGKWVAEIREPRKRSRKWLGTFATAEDAARAYDRAALILYGSRAQLNLQPSPSSSSSSSSASASSRPSNSSSAQTLRPLLPRPPATSAFLPYGLYNTQFLCPVNNALQGQHHPQKVVQLYGSPKSDGGNYTANLDDSTIAATLYQNHSRHDLHASNQEKNSRQSDCMYDNTSSMVGSGLSSSSQTIITPQTAALDPPVAAGAVSVGSPSMWPMSNEEEYPSILWDYNDPFFFDF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1807 282 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Prci2g1807 282 MobiDBLite consensus disorder prediction 95 125 - -
Prci2g1807 282 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 21 217 - -
Prci2g1807 282 MobiDBLite consensus disorder prediction 95 130 - -
Prci2g1807 282 SUPERFAMILY DNA-binding domain 41 98 IPR016177 GO:0003677
Prci2g1807 282 CDD AP2 40 97 IPR001471 GO:0003700|GO:0006355
Prci2g1807 282 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Prci2g1807 282 MobiDBLite consensus disorder prediction 198 218 - -
Prci2g1807 282 FunFam Ethylene-responsive transcription factor 2 40 98 - -
Prci2g1807 282 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Prci2g1807 282 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Prci2g1807 282 Pfam AP2 domain 40 89 IPR001471 GO:0003700|GO:0006355
Prci2g1807 282 MobiDBLite consensus disorder prediction 1 43 - -
Prci2g1807 282 MobiDBLite consensus disorder prediction 17 32 - -
Prci2g1807 282 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1807 Prci-Chr2 13254037 13255471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1807 27 282 AP2-EREBP Transcription Factor Family AT2G40220 45.724 4.15e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci2g1807 AP2 1.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1807 K09286 - zju:107404421 199.134