Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1802 ATGAAAAGCATGAAGGGCTATGAGCCCCGTTCCAGTTCTTCCTGCGCTGCCTGCAAGCTCCTCAAGCGTCGCTGCACCCCCACCTGCATCTTCGCTCCCTACTTTCGCTCCGACGAGTGCAAGAAATTCGCCAAGGTCCACAAGGTCTTCGGCGCCAGCAATGTCAGCAAGATCCTCTTTGAGGTCCCCGAGGACCAGCGGGAGGACACCGTCAACTCCCTCGCCTATGAGGCCGACGCTCGCCTCAAGGACCCGGTCTACGGTTGCATTGGCGCCATTGCTCTCCTCCAGACCAAGATGTTCGAGCTCCAGCACGACCTCGCCCTCGCCAGGGCTCGCCTCGCTCGTTATTCCTCCGCCTCCGCCTCCGCCACCGACGCCTTCCTCGCCTTCCCTTCTTCTTTCGACGATACCTTCCCCGCTCACCCGGCCCTGCCTCCTTTCCCCGACTCTTCTTCCTCTTGCTGCGACGTCGACGACGGCTTCTCCTCGTCCCAGGTTCAGTTATCGAGCCGACATGATATGGTGGATGATTTTTTCCAAACCCCATATATATTTTGA 561 0.59 MKSMKGYEPRSSSSCAACKLLKRRCTPTCIFAPYFRSDECKKFAKVHKVFGASNVSKILFEVPEDQREDTVNSLAYEADARLKDPVYGCIGAIALLQTKMFELQHDLALARARLARYSSASASATDAFLAFPSSFDDTFPAHPALPPFPDSSSSCCDVDDGFSSSQVQLSSRHDMVDDFFQTPYIF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1802 186 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Prci2g1802 186 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Prci2g1802 186 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1802 Prci-Chr2 13220473 13221301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1802 4 123 AS2 family AT3G11090 78.333 2.35e-66 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci2g1802 LOB 5.2e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1802 2 13220473 13221301 Prci2g1802 2 13220473 13221301 ECH