Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1793 ATGAAGGAGATGGAGAGGCTGGCGGAGGTAACCGAATCAGAGATTCGAATAGACTTCTCTCTCAACTGCAAATGCCGAGCCACCGTGAGTCTCCGATCTCTATGTGCTGCCTCGCCACTGGCCTTCAAGGTCCAGACCTCCTCCCCCAACAAGTTCCTCGTTAATCCCCCCGCCGGACTCATCGCTCCTCTCTCTTACGCCACCTTCCAAGTCATCCTCAAGCCTCAGTCCCAACTTCCCCCAACGTTCCCCCGCTCTCCCTCCGATCGCTTCCTCATCAAGCTCGCTCAATTCCCTCCCAACTCCTCCAATCCCGTTCCCTCTCACTCCATTAATTCATGGTTCTCCTCTCTCCCATCCTCCGCTTCCACTCATAATCTCAAACTCAAGGTTGCCTTCGTCGGCCCCCTCCTTCTCCGCCATTCTGTCGCGCGTGGCGATTCAGATGCCGTCAGGAACCTCATCAAACGGCAGAGGTCTCTACTCGCCGATTTGTCGCCCAATGAAGCCGAGTCGCTCCTCCGAGTCGCCACCGGGTTGGCTAACCCGGACGGCATGGTTCACTTGCTGTTGGAAGCCGGGTTGAGGGTGGAGGAGGCACTGGGATCTGGTAACGTGGACCAGAGATGGGCTTCGAAGGGCTGGGATGAGTTACACGTGGCGGCAGCTTTTGATCTGGCGGATGACATCCTGAGGTTGTTAAAGACGAATCCGTCGTGGCCGTTGGATTCCAGAGATCACAAGGGTAGGACCCCTTTGCATTTGGCGGCAGATAAGGGAAATATCAAGTGCGCGCGCGTGCTGGTGGAGGGCGGTGCCAATGTGAATGGCAGGTGTAACGACGGTCGTACGCCGTTATACAGAGCGGCGGCGAATGGTGACCGGAGGATGGTGGAAATGCTGGTTGAGATGGGCGCCGACCCAACTATAGCCGACGATCGTGGCCGTTCGGCCCTTTCCATTGCTAGTGACGAAGGACACCAGAAAGAGGTGGTGGAAATAATGGAGCAAGGAGAAGAAGTACTGGACGCAGCGAGGCATGGAGACGTGAAGAAACTGGAGTCACTGTTGAAGAGAGGAGCGAATGTAGAGTACCGTGATCAGTATGGTTTGACAGCACTTCATGCGGCAGCCATGAAAGGGCACAGAGAGATGGTATGGATGCTGACAGAAGCAGGACTGGACTTGGAATGTGAGGACGAGGAAGGTCACGCGCCGCTGCATATGGCGGTGGGGAGCGGTGACCAAGAGACCATACGAGTGTTACTGAACAAGGGAGTGAATGTAAATGCTACTAACAAGAAGGGCGCCACCCCTTTGTACATGGCTAGAATTTTGGGATACGATGCCATTGCTGACTTCCTTGTCACCAGAGGAGCAATGTCCTGTTTTCCTGTGATTTTATCCTAA 1410 0.5496 MKEMERLAEVTESEIRIDFSLNCKCRATVSLRSLCAASPLAFKVQTSSPNKFLVNPPAGLIAPLSYATFQVILKPQSQLPPTFPRSPSDRFLIKLAQFPPNSSNPVPSHSINSWFSSLPSSASTHNLKLKVAFVGPLLLRHSVARGDSDAVRNLIKRQRSLLADLSPNEAESLLRVATGLANPDGMVHLLLEAGLRVEEALGSGNVDQRWASKGWDELHVAAAFDLADDILRLLKTNPSWPLDSRDHKGRTPLHLAADKGNIKCARVLVEGGANVNGRCNDGRTPLYRAAANGDRRMVEMLVEMGADPTIADDRGRSALSIASDEGHQKEVVEIMEQGEEVLDAARHGDVKKLESLLKRGANVEYRDQYGLTALHAAAMKGHREMVWMLTEAGLDLECEDEEGHAPLHMAVGSGDQETIRVLLNKGVNVNATNKKGATPLYMARILGYDAIADFLVTRGAMSCFPVILS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1793 469 Gene3D - 137 338 IPR036770 -
Prci2g1793 469 ProSiteProfiles Ankyrin repeat region circular profile. 248 276 - -
Prci2g1793 469 ProSiteProfiles Ankyrin repeat profile. 402 434 IPR002110 GO:0005515
Prci2g1793 469 Gene3D - 339 464 IPR036770 -
Prci2g1793 469 SMART ANK_2a 281 310 IPR002110 GO:0005515
Prci2g1793 469 SMART ANK_2a 435 465 IPR002110 GO:0005515
Prci2g1793 469 SMART ANK_2a 402 431 IPR002110 GO:0005515
Prci2g1793 469 SMART ANK_2a 248 277 IPR002110 GO:0005515
Prci2g1793 469 SMART ANK_2a 314 343 IPR002110 GO:0005515
Prci2g1793 469 SMART ANK_2a 213 243 IPR002110 GO:0005515
Prci2g1793 469 SMART ANK_2a 369 398 IPR002110 GO:0005515
Prci2g1793 469 SMART ANK_2a 134 163 IPR002110 GO:0005515
Prci2g1793 469 ProSiteProfiles Ankyrin repeat region circular profile. 369 401 - -
Prci2g1793 469 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 143 334 - -
Prci2g1793 469 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 132 IPR000535 -
Prci2g1793 469 SUPERFAMILY PapD-like 13 141 IPR008962 -
Prci2g1793 469 Gene3D Immunoglobulins 2 136 IPR013783 -
Prci2g1793 469 ProSiteProfiles Ankyrin repeat region circular profile. 281 313 - -
Prci2g1793 469 SUPERFAMILY Ankyrin repeat 144 460 IPR036770 -
Prci2g1793 469 Pfam Ankyrin repeats (many copies) 249 302 IPR002110 GO:0005515
Prci2g1793 469 Pfam Ankyrin repeats (3 copies) 344 433 IPR002110 GO:0005515
Prci2g1793 469 ProSiteProfiles Ankyrin repeat profile. 248 280 IPR002110 GO:0005515
Prci2g1793 469 PRINTS Ankyrin repeat signature 249 264 IPR002110 GO:0005515
Prci2g1793 469 PRINTS Ankyrin repeat signature 418 432 IPR002110 GO:0005515
Prci2g1793 469 ProSiteProfiles Ankyrin repeat profile. 369 401 IPR002110 GO:0005515
Prci2g1793 469 ProSiteProfiles Ankyrin repeat region circular profile. 402 434 - -
Prci2g1793 469 Pfam MSP (Major sperm protein) domain 38 105 IPR000535 -
Prci2g1793 469 ProSiteProfiles Ankyrin repeat profile. 281 313 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1793 Prci-Chr2 13185050 13186935 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1793 344 430 Ion Channels AT2G25600 37.931 2.07e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1793 - - pcin:129303436 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1793 2 13185050 13186935 Prci2g1793 2 13185050 13186935 ECH