Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1791 ATGGCTCCCAACCTCGAATGTCGCATGTACGAGGCCAAGTATCCGGAGGTGGACATGGCCGTTATGATACAGGTCAAGAACATCGCCGACATGGGCGCTTACGTCTCCCTCCTCGAGTACAACAACATCGAGGGCATGATCTTGTTCTCCGAGCTCTCTCGCCGCCGGATTCGTAGTGTCAGCAGTCTCATCAAGGTTGGCCGCACCGAACCCGTCATGGTTTTAAGGGTCGACAAGGAAAAGGGCTACATCGATTTGAGCAAGAGAAGGGTATCTGAGGAGGATATCCAGGCTTGCGAGGAGAGGTACAACAAGAGCAAGCTTGTTCACTCCATCATGCGTCACGTTGCTGAGACTGAAAATATCGATTTAGAGGAGCTGTATATTCACATTGGGTGGCCTCTATATCGAAAGTATGGTCATGCTTTTGAGGCATTTAAAATAATTGTTACTGATCCTGATTCAGTTTTGAATTCCCTCACCCGTGAGGTCAAGGAGGTTGGCCCTGATGGGCAGGAGGTGACCAAGGTGGTGCCAGCTGTATCAGAAGAAGTGAAGGAAGCTCTAGTAAAGAACATCAGAAGACGAATGACACCCCAGCCTTTGAAAATTAGGGCAGATATTGAAATGAAGTGCTTTCAGTTTGATGGAGTTCTCCATATTAAGGAAGCAATGCGGAAAGCTGAAGCTGCTGGAAATAATGATTGCCCAGTGAAGATTAAACTTGTTGCTCCCCCACTTTATGTTCTTACCACTCAGACTCTCGACAAGGAGCAAGGAATATTGGTTCTTAACGATGCTATTGTGGCCTGCACTGAAGCCATAGAGCAACACAAGGGGAAACTTGTTGTGAAGGAGGAGCCCAGAGCAGTGAGTGAACGAGATGATAAATTGCTTGCTGAACACATGGCTAAGCTACGCCAAGAGAACGAGGAGGTCAGTGATGACGAAGGTGAAGAGGAAGAAGATACTGGAATGGGAGAACTTGATGTGGAGAACCAGGGTGCTGGGATAACAGAGTGA 1023 0.478 MAPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRTEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETENIDLEELYIHIGWPLYRKYGHAFEAFKIIVTDPDSVLNSLTREVKEVGPDGQEVTKVVPAVSEEVKEALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNNDCPVKIKLVAPPLYVLTTQTLDKEQGILVLNDAIVACTEAIEQHKGKLVVKEEPRAVSERDDKLLAEHMAKLRQENEEVSDDEGEEEEDTGMGELDVENQGAGITE 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1791 340 Gene3D - 3 91 IPR012340 -
Prci2g1791 340 Gene3D Translation initiation factor 2; subunit 1; domain 2 92 195 IPR024054 -
Prci2g1791 340 Gene3D EIF_2_alpha 202 324 IPR024055 -
Prci2g1791 340 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 1 329 IPR011488 GO:0003723|GO:0003743
Prci2g1791 340 MobiDBLite consensus disorder prediction 313 328 - -
Prci2g1791 340 CDD S1_IF2_alpha 15 90 IPR044126 GO:0003723
Prci2g1791 340 FunFam Eukaryotic translation initiation factor 2 subunit alpha 92 196 - -
Prci2g1791 340 FunFam Eukaryotic translation initiation factor 2 subunit alpha 4 91 - -
Prci2g1791 340 SUPERFAMILY eIF2alpha middle domain-like 91 196 IPR024054 -
Prci2g1791 340 Pfam Eukaryotic translation initiation factor 2 alpha subunit 127 257 IPR011488 GO:0003723|GO:0003743
Prci2g1791 340 SUPERFAMILY eIF-2-alpha, C-terminal domain 200 316 IPR024055 -
Prci2g1791 340 SMART S1_6 16 89 IPR022967 -
Prci2g1791 340 FunFam Eukaryotic translation initiation factor 2 subunit 1 202 324 - -
Prci2g1791 340 MobiDBLite consensus disorder prediction 303 340 - -
Prci2g1791 340 ProSiteProfiles S1 domain profile. 18 89 IPR003029 GO:0003676
Prci2g1791 340 Pfam S1 RNA binding domain 15 89 IPR003029 GO:0003676
Prci2g1791 340 Coils Coil 299 323 - -
Prci2g1791 340 SUPERFAMILY Nucleic acid-binding proteins 12 94 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1791 2 340 Eukaryotic Initiation Factors Gene Family AT5G05470 80.938 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1791 K03237 - gmx:100805950 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1791 2 13176397 13180419 Prci2g1791 2 13176397 13180419 ECH