Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1790 ATGGGAGGCAATTCACCTTGTGCTTCATGCAAGTTGCTACGGCGTCGTTGCGCCAAAGATTGCATCTTCGCTCCCTATTTCCCTTCCGATGACCCTCACAAGTTCGCCATCGTTCACAAGGTCTTCGGCGCCAGCAACGTCGGCAAAATGTTGCAGGAGCTTCCAGTTCATCAGAGAGCCGATGCAGTGAGCAGTTTAGTGTATGAAGCGAATGCAAGAGTTCGAGACCCAGTGTATGGGTGTGTCGGAGCTATATCGTATCTGCAGAATCAAGTTTCAGAGCTTCAAATGCAGCTCGCAGTGGCTCAGGCAGAGATCCTGTGCATCCAGATGCAGCAGGATCCGGAGCCAGCAGTGATGCAAAACGCAGAAGTTGACCCAAATCAGAGACCTTATTTTCTGCAAAACGACCTGCCTCATCAGTACCTTAACTTTGCGTCTTCCAGCAATGTAATTCAGGACTCTCTCCAGAGGGAGAGTATCTTCGGACACGACATGGTTTCTTAA 507 0.499 MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVGKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQQDPEPAVMQNAEVDPNQRPYFLQNDLPHQYLNFASSSNVIQDSLQRESIFGHDMVS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1790 168 Coils Coil 85 105 - -
Prci2g1790 168 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Prci2g1790 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 126 - -
Prci2g1790 168 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1790 Prci-Chr2 13165758 13166822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1790 3 115 AS2 family AT2G30130 92.920 2.26e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci2g1790 LOB 1.9e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1790 - - jre:108991811 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1790 2 13165758 13166822 Prci2g1790 2 13165758 13166822 ECH