Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1779 ATGTCCAGACTCTCTGCTCCCCAGTTCGATCACTCTGAACACAAATGTCGCAATAGACTCTTCCCCTCCCAAGTTCCTATCTTTTTCTCTTATTATACTTCCCCACTGATTGTTATGCTCTTCATTACGATAATGGGGAACAGAAATATTCTGCAGCACAACCCTTCTCAGGTTTTGCAACTCAGGACGATAAATGCAGCAGATTGGCACTATATTTTGGACAAGAAGAGAGAGAAATGGAAGAATCGTCGTGAAACCCAAAACCCATTTCAATGGTTTCTCTGGGTCCCTTGTTTGTGGATTCTTCTGGTCCCCATTTGTGTGAAGCCAGTTTTGGGCGAAGGGGATCGTTGGGATGGAGTGGTCGTCACAGAATCAAATTTCTTGGCACTTCAAGCGTTCAAGCAAGAGCTGATTGATCCCAAAGGCTTCTTGCGAAGCTGGAATGACAGCGGCTACACTACTTGTTCTGGAGGTTGGGTTGGGATCAAGTGTGCTCAGGGGCAGGTGATCGTGATCCAGCTTCCATGGAAGGGACTGAAAGGGCACATCACAGAGAGGATAGGCCAACTTGCAGGCCTTCGAAAGCTTAGTCTTCATGATAACCAAATTGGAGGGTCAATCCCTTCCTCGTTGGGGCTTCTTCCTAATCTCAGAGGGGTTCAGCTATTCAACAATAGGATAGAAGGGTCCATCCCTCCCTCATTAGGTTCTTGCCTTTTGCTTCAGTCCTTAGACCTAAGTAATAACTTACTGACAGGGAGAATCCCTGATAGCCTCTTCAATTCTTCTAAGCTTTATTGGCTTAATTTGAGCTTCAATTCCTTGTCTGGTTCAATACCAGCCACCCTCACTCGTTCACCTTCTCTAACCTTCGTTTCTCTTCAACACAACAATCTATCTGGCTCTATCCCGAACTCATGGGGTGGGACTCTGAAAAATGATTTCATTGGGTTTCAGAATTTGATCCTAGACTATAATTTATTCTCCGGAACTATTCCTGCTTCTTTGGGCAGCTTAACCGAACTCAGAGAGATTTCTCTAAGTCATAATCAGCTTAGTGGAGCTATCCCAAATGAAATAGGGAGCCTTGCTAGACTTAAAACGTTGGATTTTTCAAATAATGCCCTCAACGGAAGTTTGCCTGCTAGTCTCTCTAACTTGTCATCGCTTACTGCGTTGAATGTTGAGAACAACCACCTCGATGATCAAGTCCCAGAATCTCTAGGTAGATTACGTAACCTTTCTGTTCTTAATTTGAGGAGAAATCAACTTAGTGGTCACATTCCTGAAAGTATTGGCAACGTTTCCTCGCTTAAACAGCTTGATTTGTCTCTAAATAATCTCAGTGGTGAAATTCCTTCCTCCTTCGACAATTTACGTAGCCTTAATTTCTTCAATGTGTCTTACAATAATCTGTCTGGTCCTGTTCCCTCTCTACTTGCCCAAAAATTTAACTCAAGCTCATTTTTGGGTAATATCCAACTATGTGGGTACGATCCTTCAGTCCCATGTCCTTCTCCAGCGCCATCTCAAATTGTCTCTACTCCATCTCCTGTGACATCAAAACACCATCACCGTTGGAAACTACATACCAAAGACATAATTCTCATAGCAGCGGGGGCTCTCCTCGTACTCCTTGTAATAATATGTTGCGTCCTGATCTTCTTCTTGATCAGAAGAAGAGCGGCATCGAAAGCAGAGAAAGATGAAGCTGCTGGCACTGCCAGGACCGAAAAAGGAGTCACTGCAGCCGCAGCCCGAGCTGCTGGTGCAGTTGAGCCCGGCGGTGAGGCAGGAGGGAAACTAGTCCACTTTGATGGCCCAACAGCTTTTACAGCCGATGATCTTTTGTGTGCAACCGCAGAGATAATGGGAAAAAGCACCTATGGGACAGTGTACAAAGCCACATTAGAGGACGGAAGTGAGGTTGCAGTGAAGAGACTGAGAGAAAAGATCACCAAGGGCCAAAGAGAATTTGAATCCGAGGTCAACATTCTTGGGAAAATTCGTCACCCAAATCTTTTGGCACTGAGGGCATATTATCTGGGACCCAAGAGTGAAAAGCTTCTGGTTTTTGATTATATGCCTAGAGGAAGTCTTGCTGCTTTCCTGCACGCTCGTGGGCCAGAAACAGCCATCGATTGGCCAACAAGAATGGGAATAGCACAAGGCATGGCTCGTGGCTTGTTCTACCTTCACTCCCATGAGAACATCATCCACGGGAACCTGACATCCAGCAATGTCCTGCTTGACCAAAATACAAATGCTAAAATTGCAGATTTTGGTCTTTCTCGGTTAATGACAACTGCTGCTAGTTCTAATGTGATTGCCGCTGCCGGAGCGTTAGGCTACAGGGCGCCCGAGCTCTCAAAGCTGAAGAAAGCAACCACAAAAACTGATGTGTACAGCCTGGGTGTGATCTTGTTGGAACTCCTAACAGGGAAGTCACCAGGTGAGGCTATGAATGGGGTGGATTTGCCTCAGTGGGTTGCCTCCATTGTGAAGGAAGAGTGGACGAATGAGGTGTTCGACGTGGAGCTAATGAGAGATGCATCTACCATTGGTGATGAGTTGTTAAACACATTGAAACTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGGCCAGAAGTTCAGCAAGTACTACACCAATTGGAAGAAATTAGACCAGAAAGATCAGTCAGCTCTGTGGATGATGGAGCCGTCCCATCAACCAGTGATTAG 2730 0.456 MSRLSAPQFDHSEHKCRNRLFPSQVPIFFSYYTSPLIVMLFITIMGNRNILQHNPSQVLQLRTINAADWHYILDKKREKWKNRRETQNPFQWFLWVPCLWILLVPICVKPVLGEGDRWDGVVVTESNFLALQAFKQELIDPKGFLRSWNDSGYTTCSGGWVGIKCAQGQVIVIQLPWKGLKGHITERIGQLAGLRKLSLHDNQIGGSIPSSLGLLPNLRGVQLFNNRIEGSIPPSLGSCLLLQSLDLSNNLLTGRIPDSLFNSSKLYWLNLSFNSLSGSIPATLTRSPSLTFVSLQHNNLSGSIPNSWGGTLKNDFIGFQNLILDYNLFSGTIPASLGSLTELREISLSHNQLSGAIPNEIGSLARLKTLDFSNNALNGSLPASLSNLSSLTALNVENNHLDDQVPESLGRLRNLSVLNLRRNQLSGHIPESIGNVSSLKQLDLSLNNLSGEIPSSFDNLRSLNFFNVSYNNLSGPVPSLLAQKFNSSSFLGNIQLCGYDPSVPCPSPAPSQIVSTPSPVTSKHHHRWKLHTKDIILIAAGALLVLLVIICCVLIFFLIRRRAASKAEKDEAAGTARTEKGVTAAAARAAGAVEPGGEAGGKLVHFDGPTAFTADDLLCATAEIMGKSTYGTVYKATLEDGSEVAVKRLREKITKGQREFESEVNILGKIRHPNLLALRAYYLGPKSEKLLVFDYMPRGSLAAFLHARGPETAIDWPTRMGIAQGMARGLFYLHSHENIIHGNLTSSNVLLDQNTNAKIADFGLSRLMTTAASSNVIAAAGALGYRAPELSKLKKATTKTDVYSLGVILLELLTGKSPGEAMNGVDLPQWVASIVKEEWTNEVFDVELMRDASTIGDELLNTLKLALHCVDPSPSARPEVQQVLHQLEEIRPERSVSSVDDGAVPSTSD 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1779 909 Pfam Protein tyrosine and serine/threonine kinase 622 887 IPR001245 GO:0004672|GO:0006468
Prci2g1779 909 Gene3D Phosphorylase Kinase; domain 1 625 696 - -
Prci2g1779 909 Gene3D Ribonuclease Inhibitor 403 508 IPR032675 -
Prci2g1779 909 Pfam Leucine rich repeat 413 473 IPR001611 GO:0005515
Prci2g1779 909 Pfam Leucine rich repeat 242 300 IPR001611 GO:0005515
Prci2g1779 909 Gene3D Ribonuclease Inhibitor 127 280 IPR032675 -
Prci2g1779 909 Gene3D Transferase(Phosphotransferase) domain 1 697 903 - -
Prci2g1779 909 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 386 505 - -
Prci2g1779 909 ProSiteProfiles Protein kinase domain profile. 619 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1779 909 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 124 315 - -
Prci2g1779 909 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 318 385 - -
Prci2g1779 909 SUPERFAMILY L domain-like 160 501 - -
Prci2g1779 909 CDD STKc_IRAK 625 890 - -
Prci2g1779 909 SUPERFAMILY Protein kinase-like (PK-like) 623 891 IPR011009 -
Prci2g1779 909 FunFam Leucine-rich repeat receptor-like protein kinase 605 695 - -
Prci2g1779 909 FunFam Pollen receptor-like kinase 1 696 901 - -
Prci2g1779 909 Pfam Leucine rich repeat N-terminal domain 129 165 IPR013210 -
Prci2g1779 909 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 327 890 - -
Prci2g1779 909 Gene3D Ribonuclease Inhibitor 281 402 IPR032675 -
Prci2g1779 909 SMART LRR_typ_2 436 459 IPR003591 -
Prci2g1779 909 SMART LRR_typ_2 340 363 IPR003591 -
Prci2g1779 909 SMART LRR_typ_2 242 263 IPR003591 -
Prci2g1779 909 SMART LRR_typ_2 412 435 IPR003591 -
Prci2g1779 909 SMART LRR_typ_2 388 411 IPR003591 -
Prci2g1779 909 SMART LRR_typ_2 364 387 IPR003591 -
Prci2g1779 909 SMART LRR_typ_2 215 239 IPR003591 -
Prci2g1779 909 SMART LRR_typ_2 191 214 IPR003591 -
Prci2g1779 909 CDD TM_EGFR-like 535 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1779 Prci-Chr2 13081635 13084994 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1779 118 892 Receptor kinase-like Gene Family AT3G51740 66.067 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci2g1779 PK_Tyr_Ser-Thr 7.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1779 - - aprc:113851294 1214.52