Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1760 ATGGCTTCTAAGGAGCCCAAGAGAGCAGCTCTGCACCAGAAGTTGCAGCTTCTTCGTTCTATTACTAACTCTCATGCTCTAGACAAAACCTCGATCATATTGGACGCTACAAAGTACATCGAAGAGTTAAAGCAAAAGGTAGAAAAACTGAATCAAGACATAGCCACTGCAGAGACTACTTCAAAAAACCAAAATCATATGCCTATGGTTACAGTAGAAACCCTAGAGAAGGGATTCCTTATAAATGTTTATTCAGCCAAGAGCTGCCCAGGTCTTCTAGTTCCCATATTGGAGGCCTTCGAAGAGATGGGTCTCGATGTGAAGGAAGCTAGGGTTTCATGTTCAGACACTTTCAGATTTCAGGCTGTAGGAGGAGAAATATGGTGGAATGGTTTGTAG 399 0.4261 MASKEPKRAALHQKLQLLRSITNSHALDKTSIILDATKYIEELKQKVEKLNQDIATAETTSKNQNHMPMVTVETLEKGFLINVYSAKSCPGLLVPILEAFEEMGLDVKEARVSCSDTFRFQAVGGEIWWNGL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1760 132 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 7 123 - -
Prci2g1760 132 Coils Coil 33 60 - -
Prci2g1760 132 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 56 IPR036638 GO:0046983
Prci2g1760 132 Gene3D - 5 69 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1760 Prci-Chr2 12953148 12954795 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1760 11 127 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 30.233 6.86e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1760 - - gmx:100814138 196.052