Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1759 ATGGCTTCTAAGGAGCCCAAGAGAGCAGCTCTGCACCAGAAGTTGCAGCTTCTTCGTTCTATTACTAACTCTCATGCTCTAGACAAAACCTCGATCATATTGGACGCTACAAAGTACATCGAAGAGTTAAAGCAAAAGGTAGAAAAACTGAATCAAGACATAGCCACTGCAGAGACTACTTCAAAAAACCAAAATCATATGCCTATGGTTACAGTAGAAACCCTAGAGAAGGGATTCCTTATAAATGTTTATTCAGCCAAGAGCTGCCCAGGTCTTCTAGTTCCCATATTGGAGGCCTTCGAAGAGATGGGTCTCGATGTGAAGGAAGCTAGGGTTTCATGTTCAGACACTTTCAGATTTCAGGCTGTAGGAGGAGAAGAAGAAGAAGAAGGTGACAGCATGGATGCAGAAGCAGTGACGCAAGCTGTGGGAAGAGCCATTGAGAATTGGAGAGAGAGTACGAGTCAACAGTAG 474 0.4409 MASKEPKRAALHQKLQLLRSITNSHALDKTSIILDATKYIEELKQKVEKLNQDIATAETTSKNQNHMPMVTVETLEKGFLINVYSAKSCPGLLVPILEAFEEMGLDVKEARVSCSDTFRFQAVGGEEEEEGDSMDAEAVTQAVGRAIENWRESTSQQ 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1759 157 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 56 IPR036638 GO:0046983
Prci2g1759 157 Coils Coil 33 60 - -
Prci2g1759 157 Gene3D - 6 69 IPR036638 GO:0046983
Prci2g1759 157 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 7 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1759 Prci-Chr2 12953148 12954795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1759 11 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 30.612 2.64e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1759 - - tcc:18600910 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1759 2 12953148 12954795 Prci2g1759 2 12953148 12954795 CCT
Prci2g1759 2 12953148 12954795 Prci2g1759 2 12953148 12954795 ECH
Prci8g0474 8 3072799 3074360 Prci2g1759 2 12953148 12954795 ECH
Prci13g2256 13 37215988 37217554 Prci2g1759 2 12953148 12954795 ECH