Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci2g1755 | ATGGATTGCTCTGTTTGCACAACAATGCCATTGATATTAAGGCCACCCAGGAATACCATATGTGGGGCTTGCTATGAAGGAGCCAGAAGCATTCTCAATATGATGAACAAGATTGAATCTGATAAAACCATGGACAGTCCTAATGCTTCTCCTGCTTCACCCTCCCATAATTCGTGTAAGTCACTTTCGACATTTAAAAGATGGTACGCACAGCAGTTAGATCAGATGAATGAACATAAACATCAAGCAGCCTTCCTTGAAAGTTTTGTTGATGCATTCAGAGCACAAATCCACACTGATATAACGGTCACTCCTGGCAATCATGGGTCTCCGATACCTTCCCATAAAGCCGTTTTGGCGACAAGGTCAGAGGTTTTCAAGAACATGTTGGACTCAGATGAATGTAAAGCTGCACCTACTAACAACATTACAATACCCGAATTGAACTGTGAAGAGCTAGAGAGTCTTCTGGAGTTTCTTTACAGAGGGAGCTTGGGTCCAGAAAAATTGGAGCAGCATGTATTTGCCTTGTCACTCGCAGCTGATAAATATGGGATCGCTTATTTACAGAAGCAATGCGAGCAGTACATGCTGAATTCACTAAGCATCTCTAATGCGCTTGATGTGTTGGAGATTGCAGACACTTGTTCCAACCAGAAGTTGAAGGACACCACTATGAAGTTCTTAGTTGAAAACATTCAGGAGATAGTTTTGTCCTTGCAATATGAAGCATTTGTGCACAGAAGCCCTCATCTAACCGTGCAACTTTCCAGGGAATCGTTGAAGGTTGCCAATAATATCAAATGA | 807 | 0.4213 | MDCSVCTTMPLILRPPRNTICGACYEGARSILNMMNKIESDKTMDSPNASPASPSHNSCKSLSTFKRWYAQQLDQMNEHKHQAAFLESFVDAFRAQIHTDITVTPGNHGSPIPSHKAVLATRSEVFKNMLDSDECKAAPTNNITIPELNCEELESLLEFLYRGSLGPEKLEQHVFALSLAADKYGIAYLQKQCEQYMLNSLSISNALDVLEIADTCSNQKLKDTTMKFLVENIQEIVLSLQYEAFVHRSPHLTVQLSRESLKVANNIK | 268 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci2g1755 | 268 | SMART | BTB_4 | 99 | 201 | IPR000210 | GO:0005515 | |
| Prci2g1755 | 268 | ProSiteProfiles | BTB domain profile. | 99 | 169 | IPR000210 | GO:0005515 | |
| Prci2g1755 | 268 | PANTHER | BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED | 20 | 265 | IPR044784 | - | |
| Prci2g1755 | 268 | Gene3D | Potassium Channel Kv1.1; Chain A | 68 | 202 | IPR011333 | - | |
| Prci2g1755 | 268 | CDD | BACK | 202 | 247 | - | - | |
| Prci2g1755 | 268 | SUPERFAMILY | POZ domain | 77 | 199 | IPR011333 | - | |
| Prci2g1755 | 268 | Gene3D | - | 203 | 267 | - | - | |
| Prci2g1755 | 268 | Pfam | BTB/POZ domain | 94 | 200 | IPR000210 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci2g1755 | Prci-Chr2 | 12944755 | 12946274 | Tandem |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | TRAF | Prci2g1755 | BTB | 8.5e-21 | CL0033 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci2g1755 | K10523 | - | gmx:100777561 | 339.347 |