Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1750 ATGGAAAATTTTGAAGAGATAGGGAAGAAGATCAAGAGGGAGGGAGATGTTTCATCGCAAATGGGAAGAAGACACATGTTGGGCCCTCCTGGAACCCTAAACACCATAACCCCTTGTGCAGCATGTAAGCTCTTGAGGCGAAGGTGTGCTCAGGAATGTCCCTTTTCTCCTTACTTTTCCCCTCATGAGCCCCAGAAATTTGCTTCTGTTCACAAAGTCTTCGGTGCTAGCAACGTCTCCAAGATGCTCATGGAGGTACCAGAGAGTCAAAGAGCGGACGCAGCAAATAGTCTAGTGTATGAGGCAAATGTGAGGCTTAGAGACCCAGTTTACGGATGCATGGGCGCAATTTCTGCTTTGCAGCAACAAGTTCAATCTTTACAAGCTGAACTTAATGCAGTAAGGGCTGAAATACTTAAATACAAACTTAGGGAAGCTACTAACATCATACCCTCCCCTCATCATATTCCTGTCCTCCCTAATTCCTCTCGGGCCGTGTCAATCGCCGCTCCACCACCTCCACCACCTCTGCCGCCGCCGCCTTCTCTTCCTTCTGCTTCTGATTCCTCTTCTTCCATGTATACCCAAGTCCAGCAGAGGCCTCCCACCAATTATACCACAATTTCAAGTGATAATATTTCCTATTTTGGTTAA 654 0.4694 MENFEEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRAEILKYKLREATNIIPSPHHIPVLPNSSRAVSIAAPPPPPPLPPPPSLPSASDSSSSMYTQVQQRPPTNYTTISSDNISYFG 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1750 217 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 34 196 - -
Prci2g1750 217 MobiDBLite consensus disorder prediction 1 20 - -
Prci2g1750 217 Pfam Lateral organ boundaries (LOB) domain 38 135 IPR004883 -
Prci2g1750 217 MobiDBLite consensus disorder prediction 186 217 - -
Prci2g1750 217 MobiDBLite consensus disorder prediction 167 217 - -
Prci2g1750 217 MobiDBLite consensus disorder prediction 167 185 - -
Prci2g1750 217 MobiDBLite consensus disorder prediction 1 29 - -
Prci2g1750 217 ProSiteProfiles LOB domain profile. 37 138 IPR004883 -
Prci2g1750 217 Coils Coil 117 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1750 Prci-Chr2 12908605 12910444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1750 23 217 AS2 family AT2G40470 72.081 3.73e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci2g1750 LOB 4.9e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1750 - - ccaj:109797870 326.25