Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1728 ATGACATTCAAGAGAAGGAACGGCGGACGCAATAAGCATGGGCGTGGACATGTTAAATTCATTCGATGCTCCAACTGTGGTAAATGCTGTCCCAAGGACAAGGCAATCAAGAGGTTCCTTGTGAGGAACATTGTTGAGCAAGCCGCTGTTAGGGATGTTCAGGAAGCTTGTGTCTATGAACAATACACGCTCCCCAAGCTGTATGTTAAGATGCAATATTGTGTTTCCTGTGCTATTCATTCGCATGTTGTGAGAGTTCGCTCTCGCACTGATAGGAGGAACCGTGAGCCTCCACAGCGCTTCATCAGGCGCAGGGATGATGCACCAAGACCTGGTCAACCTGGTCAAGCACCTCGTCCTGCTGGAGTAGCTGCTGCTCGCACTTGA 387 0.4987 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFIRRRDDAPRPGQPGQAPRPAGVAAART 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1728 128 MobiDBLite consensus disorder prediction 89 110 - -
Prci2g1728 128 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Prci2g1728 128 PANTHER 40S RIBOSOMAL PROTEIN S26 1 123 IPR000892 GO:0003735|GO:0005840|GO:0006412
Prci2g1728 128 MobiDBLite consensus disorder prediction 86 128 - -
Prci2g1728 128 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Prci2g1728 128 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Prci2g1728 128 FunFam 40S ribosomal protein S26 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1728 Prci-Chr2 12797751 12799794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1728 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 84.483 5.68e-70 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1728 K02976 - gmx:100808790 209.534