Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1716 ATGTCGTTTCCCGACCCTCCCCCGCTCTCCTCTCGAGGCCCCTCCCACCGCCGCGCCCAATCCGAGGGCCAATTCCGATTACCCGACGACTTCGATCTCGAGCCATCCCTCTTCGATGGCCCTTCCTTCGCTCTCGACCATCTGGGATCAGAGCACGACCTCTTATCCGCCTACATGCATCTTGACAAATCCGGATCGCAGCTTCACTCTCCATCATCCGACCCCAAACCCGGAACCTCCGAGACTCCTCATGCCAATGATGGACCCGTTGGGACTAGCGGCGACGGTGACGAGCCCCCCAGACCTCGCCATCGGCACAGCAATTCAGCCGATGGGACTTTCGTGCTCGAGGCCATTGAGGCTAAGAAGGCAATGGCTCCTGATAAGCTTGCCGAATTGTGGGTTGTTGATCCTAAGCGAGCAAAGAGGATTCTGGCAAATCGCCATTCTGCCGCTCGTTCAAAAGAGAGGAAAGCGCGCTATGTGCTAGAACTTGAGAAAAAAATTCATATTCTTCAAACAGAAGCAACCACTCTTTCAGCTCAACTAAATCTCTTCCAGAGAGATACAACTGGTTTAACAAGTGAAAATACAGAGCTAAAGCTCCGATTACAAGCTATGGAGCAACAAGCTAAGTTACGTGATGCTCTGAATGAAGCATTGAAGAAAGAGGTTGATAGGCTTAAGGTTGCTACTGGAGAGACAGTTACTTCAACCTTAACCCAAACGTATAATGTGCAAGGGCATCAAATTCCATACTCTCTAGGTTCTTTCTTCTTACATCAGCCACAGTGTGGACCAGTTGGTGAACCTCAGATCATGCAAATGCAGCAGTTACATGCACTCTCATATAATATGCCAAATCCTCATCAGCCTCTGCTTGCCGTAGCCAACCCGCATGACTTATCGGAGATGTTGCCTCAGGAATCTATTGGCCAATTCCAGGGGCTTGAGATAAGCACCGGGGGCGCTCCCCTTCTGATGCCTGATAGTCCCTCTGGTTCTGTGAAACAAACCAGCAGTGCATTTTAA 1032 0.5039 MSFPDPPPLSSRGPSHRRAQSEGQFRLPDDFDLEPSLFDGPSFALDHLGSEHDLLSAYMHLDKSGSQLHSPSSDPKPGTSETPHANDGPVGTSGDGDEPPRPRHRHSNSADGTFVLEAIEAKKAMAPDKLAELWVVDPKRAKRILANRHSAARSKERKARYVLELEKKIHILQTEATTLSAQLNLFQRDTTGLTSENTELKLRLQAMEQQAKLRDALNEALKKEVDRLKVATGETVTSTLTQTYNVQGHQIPYSLGSFFLHQPQCGPVGEPQIMQMQQLHALSYNMPNPHQPLLAVANPHDLSEMLPQESIGQFQGLEISTGGAPLLMPDSPSGSVKQTSSAF 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1716 343 Pfam bZIP transcription factor 139 197 IPR004827 GO:0003700|GO:0006355
Prci2g1716 343 Coils Coil 162 182 - -
Prci2g1716 343 MobiDBLite consensus disorder prediction 59 111 - -
Prci2g1716 343 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 9 308 - -
Prci2g1716 343 SMART brlzneu 135 199 IPR004827 GO:0003700|GO:0006355
Prci2g1716 343 MobiDBLite consensus disorder prediction 1 44 - -
Prci2g1716 343 MobiDBLite consensus disorder prediction 63 80 - -
Prci2g1716 343 CDD bZIP_plant_RF2 140 189 IPR044759 GO:0003700|GO:0006355
Prci2g1716 343 Gene3D - 138 190 - -
Prci2g1716 343 Coils Coil 204 224 - -
Prci2g1716 343 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 137 200 IPR004827 GO:0003700|GO:0006355
Prci2g1716 343 FunFam probable transcription factor PosF21 138 191 - -
Prci2g1716 343 SUPERFAMILY Leucine zipper domain 139 194 IPR046347 GO:0003700|GO:0006355
Prci2g1716 343 MobiDBLite consensus disorder prediction 322 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1716 Prci-Chr2 12703976 12708002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1716 6 323 bZIP Transcription Factor Family AT2G40620 52.907 9.09e-95 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci2g1716 bZIP_1 4.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1716 - - pcin:129301776 691.034