Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1711 ATGTCGTCGGAAGAAATTGGTCTTGCTTCAGATCAGAGGATCGATAACGGTCTTAATTCACCTCTAGTGTTCCCAGGCGACTCCTTGCGTTACAGATGCGGAGCAACGCAAAGTCGGGTTGGGGACCCGGGTTCGAAAACGAGGGAGCTTGGCGATTTATTTGATGAGAAGATGTTCTCTGTAGATCGTGATCGTTTTTTCGCGGCTCAGGGAGTGGAGTTCCGTCGTAATGTTTACGGGGATTGCTCAGACCAGCGGAACCCACCGGCTGCCCGGAATTGGAATGGGAACGGGACTGCAACTCCGAGCGGTGATGAATCGGACGGCGAGGATGGTGAAGACGATGAGGAAGTTGACGACGACGACGACGACGACGACGATGTTGAGGGAGGCGGTGACGTAGAAAGAATAGTTGATGTTAACGATGCAAGCAAAGGGAATTCCAATCCCAATTCAATTAATGATATTAACAATAACAGCGTGAGTGGTGGTAACCTGGCTAGTGCTGTGGATGGAATAACGAACGGAAAAGCTCAACATCGTTCGTCCTACGGATCCAGTAGAGAGGTGCTGGGGAAGGATGGAGAAATTGGGCCGACGCTTAATAATTCGAGGGGTAACGAAGGAGATCATCAGCAAGAAAGGTTAGATAAATCGCAGAATGCGGTCACGATTGCCGAAACTGATTGTGAGGAGTATTATTCACACTATCTTCAAGGCACGGAGGGCTCAGCTTCTGTGCAGAAAGCTATAGCGGGGGAAAATGGTTGCGGATTTAGTGGAAGAAAGGACGTTATTTATTCAAGCGAGTCAGGCGACTCGTTGAGAGCAGTGCTTTCAGATCCTATAACGGGATCTCTTATGGATGATGCAATGATATTGCCTTGTGGACATTCCTTTGGTGGAGGAGGAATACAGCATGTTATTAGAATGAAAGCTTGTTGCACTTGTTCCCAGCCCATATCTGAAGAATCAATATCTCCAAATCTATCACTTAGAGTTGCTGTGCAGGCATATCGTCGAGAAGAGGACTCACTGTTTTACCGATCATCCAAAAGAAGAAGAGAAAGAATTGATCAGGGTTGTTATGGTGATTCAACAGTTATGGAACAACCAAGAGGAAGGGGTGTTCAATTTCCATTTGCTGTGATGGACCGGGTTATTATAAAGGGGAACAAGAGGACACCACAGCGTTTTGTTGGACGGGAAGCTATTGTAACAACACAATGCCTGAATGGATGGTATGTGGTTAAGACATTGGACAACGCAGAGAGTGTTAAATTGCAGTATCGCTCGCTCGCTAAGGTTTCAGATGACCCTTCGAAACCAGCCTCCGGCAAGGTGGGACCTAATTGGCTTTAA 1362 0.4714 MSSEEIGLASDQRIDNGLNSPLVFPGDSLRYRCGATQSRVGDPGSKTRELGDLFDEKMFSVDRDRFFAAQGVEFRRNVYGDCSDQRNPPAARNWNGNGTATPSGDESDGEDGEDDEEVDDDDDDDDDVEGGGDVERIVDVNDASKGNSNPNSINDINNNSVSGGNLASAVDGITNGKAQHRSSYGSSREVLGKDGEIGPTLNNSRGNEGDHQQERLDKSQNAVTIAETDCEEYYSHYLQGTEGSASVQKAIAGENGCGFSGRKDVIYSSESGDSLRAVLSDPITGSLMDDAMILPCGHSFGGGGIQHVIRMKACCTCSQPISEESISPNLSLRVAVQAYRREEDSLFYRSSKRRRERIDQGCYGDSTVMEQPRGRGVQFPFAVMDRVIIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVSDDPSKPASGKVGPNWL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1711 453 MobiDBLite consensus disorder prediction 1 21 - -
Prci2g1711 453 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 3 448 - -
Prci2g1711 453 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 273 344 IPR013083 -
Prci2g1711 453 ProSiteProfiles U-box domain profile. 274 346 IPR003613 GO:0004842|GO:0016567
Prci2g1711 453 MobiDBLite consensus disorder prediction 1 17 - -
Prci2g1711 453 MobiDBLite consensus disorder prediction 88 104 - -
Prci2g1711 453 MobiDBLite consensus disorder prediction 176 219 - -
Prci2g1711 453 MobiDBLite consensus disorder prediction 106 132 - -
Prci2g1711 453 SUPERFAMILY RING/U-box 273 344 - -
Prci2g1711 453 MobiDBLite consensus disorder prediction 142 160 - -
Prci2g1711 453 MobiDBLite consensus disorder prediction 79 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1711 Prci-Chr2 12660429 12664129 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1711 219 453 Plant U-box Gene Family AT5G05230 60.331 1.22e-91 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1711 - - pcin:129302449 822.387