Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1707 ATGCTTGGCGTTTTTCCGTTGGTCATTTCTAGAGCTTTTAGAGATTCGGTGCTGGTGGCGATTTCCGTGAACCCATCCCTGAACGACGACGTTCTGGGTCTGATAGTATTCAAAGCTGATATTAAAGATCCGAAGGGGAAACTGGTAAACTGGAATGAAGATGATGAGAATTCCTGTGGTTGGGTCGGTGTGAAATGCAACCCTAGATCCAACAGAGTCGTCGAGCTTAACCTTGATGGGTTCTCTCTTTCGGGTAGGATAGGTCGAGGCCTCTTCCAGTTGCAATTTCTGCGCAAGCTTTCTCTGGCGAAGAACAATCTCACCGGCAGCATAAGCCCCAACATTGCTCGGCTCGACAACCTTCGAGTGATCGATTTGAGCGAGAATAATCTCTCCGGCGAGCTTCCCGATGATCTTTTCCGACAATGTGGGTCTCTAAGGGCGATTTCATTGGCAAGAAACAAGTTCACGGGGAAGATTCCCTCCAGCTTGAGCTCATGCTCGGCTCTCGCTGCAATTGACCTCTCGTTTAACCAGTTCTCAGGTCCTCTTCCTTCTGGTATCTGGACCTTGAGTGGGCTAAGGTCACTGGATTTGTCGGATAATTTGTTGGAAGGTGAGATTCCAAGGAGTGCTGAAGGATTGAAGAATTTGCGAACTATCAACTTGGCCAAAAATCACTTGTCCGGGAAGATCCCTGATGGGTTTGGAAGTTGCTTGCTTTTGAGATCTATTGATCTCAGTGAGAATTCTTTTTCTGGTAGCCTTCCCGAGGATATGAAGGAGGTCACATTGTGTGGTTATCTTAGTGTTAGTGGAAATGCTTTTTCAGGTGAGATTCCTGAATGGATTGGGGAAATGAAAAGCCTTGAGACATTGGACGTTTCTCTGAATAGATTTTCAGGTAAGGTGCCAAGCTCTATAGGAAATCTTCAGTCATTGAAGACAATGAATTTCTCTGGAAATGGTTTTTCTGGTAACCTGCCAGAGTCTTTGATAAATTGCACCAGCCTTTTAGCCCTGGATGTTAGTCAGAATTCAATGTCAGGAGATCTTCCCTCATGGATTTTTAAGTCAGATTTGCAGAAAGTTTTGGTATCAGAAAATAAATTGCGTGGAGGTCTGAAAAATTCTCTATATTCCTTGGAGGCAGTTGTTGTTCAAAGTCTTCAAGTTCTGGATTTATCTGACAATGCATTTTCTGGTGAAATTACATCTGATATCTCAGTCTTAAGCAGCTTGAAGCTCTTGAATTTATCAAAGAACGCTCTGAGTGGTCCTATACCAGCTGCCATTGGAGAATTAAAGTCCCTGAATAGTCTTGACTTGAGCGAGAACCGGCTAAATGGAAGCATACCTATGGAAATAGGAGGAGCTGTATCTTTGAAACTACTGAGATTGAAGAAAAACTATCTAGTGGGAGACATTCCAGCCTCAATTGGGAACTGCACTTCATTGTCGACTTTAATTCTATCACAGAACAGCCTGACTGGTTCGATACCTGTAGCAATAGCAAAACTGACTGATTTACAAGTTGTGGACTTGTCTTTGAACAATTTTACTGGAAACCTTCCCAAGCAATTGGCCAATCTGCCCAATCTTCTTTCCTTTAATATATCCCATAACAACCTAAAGGGTGAACTACCAGCTGGCCCCTTTTTTAATACCATTTCACCTTCTTATCTTACTGGGAATCCATCTCTTTGTGGTGCTGCTGTCAAGAAATCATGCCCTTCTGTCCTTCCAAAGCCTATTGTCCTAAATCCAAACACCACTTCTGATTATGCTCCAGGGTCATTAACTCCCAATGTTGGTCACAAAAGAATCATTCTCAGCATTTCTGCACTCATTGCCATCGGTGCAGCTGCTGTCATTGTAATTGGTGTCATTGCCATCACTGTTCTCAATCTCCATGTTCGGTCCTCTGCATCTCAAGCTCCGGCTGCCCTCACATTTTCTGCAGGGGAAGAATTTAGCCATTCCCCAACTACAGATGCCAACTCTGGCAAGCTTGTCATGTTTTCTGGTGAGCCAGACTTCAGCACTGGGGCGCATGCTTTGCTTAATAAGGATTGTGAACTTGGGCGGGGTGGGTTTGGAGCAGTGTACCAAACAGTTCTCAGAGATGGTCATGCAGTTGCAATCAAGAAGCTCACTGTGTCCAGTCTTGTCAAGTCTCAGGAAGATTTTGAAAGAGAAGTGAAGAAACTGGGAAAAGTCAGACACCAAAATCTTGTGGCACTCGAAGGTTACTATTGGACCCCATCCCTGCAGCTCCTCATATATGAGTTTGTTTCTGGTGGCAGTCTGTATAAGCATCTCCATGATGGATCAAGTGGAAATTTCCTCTCGTGGAATGAGAGGTTTCATATAATTCTTGGCACGGCAAAAGCCTTAGCTCATTTGCACCACACGAACATTATCCACTACAACATCAAGTCAACTAATGTCCTGATTGATGGCTACGGTGAAGCTAAAGTGGGCGACTTTGGCCTGGCAAGATTATTACCGATGCTTGACCGTTATGTTTTGAGCAGCAAAATTCAAAGTGCTCTTGGCTACATGGCACCAGAGTTTGCCTGCCGTACTGTGAAGATAACAGAGAAATGTGATGTATATGGGTTTGGAGTTTTGGTTTTGGAAGTGGTCACAGGGAAGAGGCCAGTTGAATACATGGAGGATGACGTGGTGGTGCTTTGCGACATGGTCAGAGGAGCTTTGGAAGAAGGAAGGGTGGAAGAATGTATTGACGGGAGGCTGCAGGGGAAGTTCCCGGCTGAGGAAGCCATTCCTGTGATGAAACTAGGCTTAATATGCACTTCACAAGTGCCTTCAAACCGACCAGATATGGGAGAGGTAGTTAATATATTGGAGCTAATTAGATGTCCCTCAGAAGGACAAGAGGAGCTTGGATGA 2916 0.4451 MLGVFPLVISRAFRDSVLVAISVNPSLNDDVLGLIVFKADIKDPKGKLVNWNEDDENSCGWVGVKCNPRSNRVVELNLDGFSLSGRIGRGLFQLQFLRKLSLAKNNLTGSISPNIARLDNLRVIDLSENNLSGELPDDLFRQCGSLRAISLARNKFTGKIPSSLSSCSALAAIDLSFNQFSGPLPSGIWTLSGLRSLDLSDNLLEGEIPRSAEGLKNLRTINLAKNHLSGKIPDGFGSCLLLRSIDLSENSFSGSLPEDMKEVTLCGYLSVSGNAFSGEIPEWIGEMKSLETLDVSLNRFSGKVPSSIGNLQSLKTMNFSGNGFSGNLPESLINCTSLLALDVSQNSMSGDLPSWIFKSDLQKVLVSENKLRGGLKNSLYSLEAVVVQSLQVLDLSDNAFSGEITSDISVLSSLKLLNLSKNALSGPIPAAIGELKSLNSLDLSENRLNGSIPMEIGGAVSLKLLRLKKNYLVGDIPASIGNCTSLSTLILSQNSLTGSIPVAIAKLTDLQVVDLSLNNFTGNLPKQLANLPNLLSFNISHNNLKGELPAGPFFNTISPSYLTGNPSLCGAAVKKSCPSVLPKPIVLNPNTTSDYAPGSLTPNVGHKRIILSISALIAIGAAAVIVIGVIAITVLNLHVRSSASQAPAALTFSAGEEFSHSPTTDANSGKLVMFSGEPDFSTGAHALLNKDCELGRGGFGAVYQTVLRDGHAVAIKKLTVSSLVKSQEDFEREVKKLGKVRHQNLVALEGYYWTPSLQLLIYEFVSGGSLYKHLHDGSSGNFLSWNERFHIILGTAKALAHLHHTNIIHYNIKSTNVLIDGYGEAKVGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGRVEECIDGRLQGKFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPSEGQEELG 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1707 971 SMART LRR_typ_2 531 555 IPR003591 -
Prci2g1707 971 SMART LRR_typ_2 215 239 IPR003591 -
Prci2g1707 971 SMART LRR_typ_2 118 142 IPR003591 -
Prci2g1707 971 SMART LRR_typ_2 387 411 IPR003591 -
Prci2g1707 971 SMART LRR_typ_2 435 459 IPR003591 -
Prci2g1707 971 SMART LRR_typ_2 191 214 IPR003591 -
Prci2g1707 971 SMART LRR_typ_2 287 311 IPR003591 -
Prci2g1707 971 Pfam Protein tyrosine and serine/threonine kinase 690 956 IPR001245 GO:0004672|GO:0006468
Prci2g1707 971 SUPERFAMILY Protein kinase-like (PK-like) 692 955 IPR011009 -
Prci2g1707 971 SUPERFAMILY RNI-like 267 568 - -
Prci2g1707 971 PANTHER LEUCINE RICH REPEAT KINASE 2 237 958 - -
Prci2g1707 971 Pfam Leucine rich repeat 193 251 IPR001611 GO:0005515
Prci2g1707 971 Pfam Leucine rich repeat 389 448 IPR001611 GO:0005515
Prci2g1707 971 Pfam Leucine rich repeat 120 180 IPR001611 GO:0005515
Prci2g1707 971 Gene3D Ribonuclease Inhibitor 307 581 IPR032675 -
Prci2g1707 971 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 28 306 - -
Prci2g1707 971 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 765 966 - -
Prci2g1707 971 SUPERFAMILY L domain-like 43 373 - -
Prci2g1707 971 PRINTS Leucine-rich repeat signature 121 134 - -
Prci2g1707 971 PRINTS Leucine-rich repeat signature 435 448 - -
Prci2g1707 971 ProSiteProfiles Protein kinase domain profile. 688 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1707 971 Gene3D Ribonuclease Inhibitor 186 263 IPR032675 -
Prci2g1707 971 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 307 581 - -
Prci2g1707 971 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 682 764 - -
Prci2g1707 971 ProSitePatterns Protein kinases ATP-binding region signature. 694 717 IPR017441 GO:0005524
Prci2g1707 971 Gene3D Transferase(Phosphotransferase) domain 1 765 969 - -
Prci2g1707 971 CDD STKc_IRAK 694 960 - -
Prci2g1707 971 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Prci2g1707 971 Gene3D Ribonuclease Inhibitor 264 306 IPR032675 -
Prci2g1707 971 Gene3D Ribonuclease Inhibitor 28 185 IPR032675 -
Prci2g1707 971 Gene3D Phosphorylase Kinase; domain 1 681 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1707 Prci-Chr2 12648836 12653165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1707 22 971 Receptor kinase-like Gene Family AT3G56370 68.796 0.0 1273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Prci2g1707 PK_Tyr_Ser-Thr 3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1707 - - gmx:100791629 1508.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1707 2 12648836 12653165 Prci2g1707 2 12648836 12653165 ECH