Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1706 ATGCGGGCGGTTTTGAATATGAGAGCTCTTTCCTTCTTGCTTTTGTTGCTTTTCATAGATTCGGTGCTGGTGGCGATTTCCGTGAACCCATCCCTGAACGACGACGTTCTGGGTCTGATAGTATTCAAAGCTGATATTAAAGATCCGAAGGGGAAACTGGTAAACTGGAATGAAGATGATGAGAATTCCTGTGGTTGGGTCGGTGTGAAATGCAACCCTAGATCCAACAGAGTCGTCGAGCTTAACCTTGATGGGTTCTCTCTTTCGGGTAGGATAGGTCGAGGCCTCTTCCAGTTGCAATTTCTGCGCAAGCTTTCTCTGGCGAAGAACAATCTCACCGGCAGCATAAGCCCCAACATTGCTCGGCTCGACAACCTTCGAGTGATCGATTTGAGCGAGAATAATCTCTCCGGCGAGCTTCCCGATGATCTTTTCCGACAATGTGGGTCTCTAAGGGCGATTTCATTGGCAAGAAACAAGTTCACGGGGAAGATTCCCTCCAGCTTGAGCTCATGCTCGGCTCTCGCTGCAATTGACCTCTCGTTTAACCAGTTCTCAGGTCCTCTTCCTTCTGGTATCTGGACCTTGAGTGGGCTAAGGTCACTGGATTTGTCGGATAATTTGTTGGAAGGTGAGATTCCAAGGAGTGCTGAAGGATTGAAGAATTTGCGAACTATCAACTTGGCCAAAAATCACTTGTCCGGGAAGATCCCTGATGGGTTTGGAAGTTGCTTGCTTTTGAGATCTATTGATCTCAGTGAGAATTCTTTTTCTGGTAGCCTTCCCGAGGATATGAAGGAGGTCACATTGTGTGGTTATCTTAGTGTTAGTGGAAATGCTTTTTCAGGTGAGATTCCTGAATGGATTGGGGAAATGAAAAGCCTTGAGACATTGGACGTTTCTCTGAATAGATTTTCAGGTAAGGTGCCAAGCTCTATAGGAAATCTTCAGTCATTGAAGACAATGAATTTCTCTGGAAATGGTTTTTCTGGTAACCTGCCAGAGTCTTTGATAAATTGCACCAGCCTTTTAGCCCTGGATGTTAGTCAGAATTCAATGTCAGGAGATCTTCCCTCATGGATTTTTAAGTCAGATTTGCAGAAAGTTTTGGTATCAGAAAATAAATTGCGTGGAGGTCTGAAAAATTCTCTATATTCCTTGGAGGCAGTTGTTGTTCAAAGTCTTCAAGTTCTGGATTTATCTGACAATGCATTTTCTGGTGAAATTACATCTGATATCTCAGTCTTAAGCAGCTTGAAGCTCTTGAATTTATCAAAGAACGCTCTGAGTGGTCCTATACCAGCTGCCATTGGAGAATTAAAGTCCCTGAATAGTCTTGACTTGAGCGAGAACCGGCTAAATGGAAGCATACCTATGGAAATAGGAGGAGCTGTATCTTTGAAACTACTGAGATTGAAGAAAAACTATCTAGTGGGAGACATTCCAGCCTCAATTGGGAACTGCACTTCATTGTCGACTTTAATTCTATCACAGAACAGCCTGACTGGTTCGATACCTGTAGCAATAGCAAAACTGACTGATTTACAAGTTGTGGACTTGTCTTTGAACAATTTTACTGGAAACCTTCCCAAGCAATTGGCCAATCTGCCCAATCTTCTTTCCTTTAATATATCCCATAACAACCTAAAGGGTGAACTACCAGCTGGCCCCTTTTTTAATACCATTTCACCTTCTTATCTTACTGGGAATCCATCTCTTTGTGGTGCTGCTGTCAAGAAATCATGCCCTTCTGTCCTTCCAAAGCCTATTGTCCTAAATCCAAACACCACTTCTGATTATGCTCCAGGGTCATTAACTCCCAATGTTGGTCACAAAAGAATCATTCTCAGCATTTCTGCACTCATTGCCATCGGTGCAGCTGCTGTCATTGTAATTGGTGTCATTGCCATCACTGTTCTCAATCTCCATGTTCGGTCCTCTGCATCTCAAGCTCCGGCTGCCCTCACATTTTCTGCAGGGGAAGAATTTAGCCATTCCCCAACTACAGATGCCAACTCTGGCAAGCTTGTCATGTTTTCTGGTGAGCCAGACTTCAGCACTGGGGCGCATGCTTTGCTTAATAAGGATTGTGAACTTGGGCGGGGTGGGTTTGGAGCAGTGTACCAAACAGTTCTCAGAGATGGTCATGCAGTTGCAATCAAGAAGCTCACTGTGTCCAGTCTTGTCAAGTCTCAGGAAGATTTTGAAAGAGAAGTGAAGAAACTGGGAAAAGTCAGACACCAAAATCTTGTGGCACTCGAAGGTTACTATTGGACCCCATCCCTGCAGCTCCTCATATATGAGTTTGTTTCTGGTGGCAGTCTGTATAAGCATCTCCATGATGGATCAAGTGGAAATTTCCTCTCGTGGAATGAGAGGTTTCATATAATTCTTGGCACGGCAAAAGCCTTAGCTCATTTGCACCACACGAACATTATCCACTACAACATCAAGTCAACTAATGTCCTGATTGATGGCTACGGTGAAGCTAAAGTGGGCGACTTTGGCCTGGCAAGATTATTACCGATGCTTGACCGTTATGTTTTGAGCAGCAAAATTCAAAGTGCTCTTGGCTACATGGCACCAGAGTTTGCCTGCCGTACTGTGAAGATAACAGAGAAATGTGATGTATATGGGTTTGGAGTTTTGGTTTTGGAAGTGGTCACAGGGAAGAGGCCAGTTGAATACATGGAGGATGACGTGGTGGTGCTTTGCGACATGGTCAGAGGAGCTTTGGAAGAAGGAAGGGTGGAAGAATGTATTGACGGGAGGCTGCAGGGGAAGTTCCCGGCTGAGGAAGCCATTCCTGTGATGAAACTAGGCTTAATATGCACTTCACAAGTGCCTTCAAACCGACCAGATATGGGAGAGGTAGTTAATATATTGGAGCTAATTAGATGTCCCTCAGAAGGACAAGAGGAGCTTGGATGA 2931 0.4449 MRAVLNMRALSFLLLLLFIDSVLVAISVNPSLNDDVLGLIVFKADIKDPKGKLVNWNEDDENSCGWVGVKCNPRSNRVVELNLDGFSLSGRIGRGLFQLQFLRKLSLAKNNLTGSISPNIARLDNLRVIDLSENNLSGELPDDLFRQCGSLRAISLARNKFTGKIPSSLSSCSALAAIDLSFNQFSGPLPSGIWTLSGLRSLDLSDNLLEGEIPRSAEGLKNLRTINLAKNHLSGKIPDGFGSCLLLRSIDLSENSFSGSLPEDMKEVTLCGYLSVSGNAFSGEIPEWIGEMKSLETLDVSLNRFSGKVPSSIGNLQSLKTMNFSGNGFSGNLPESLINCTSLLALDVSQNSMSGDLPSWIFKSDLQKVLVSENKLRGGLKNSLYSLEAVVVQSLQVLDLSDNAFSGEITSDISVLSSLKLLNLSKNALSGPIPAAIGELKSLNSLDLSENRLNGSIPMEIGGAVSLKLLRLKKNYLVGDIPASIGNCTSLSTLILSQNSLTGSIPVAIAKLTDLQVVDLSLNNFTGNLPKQLANLPNLLSFNISHNNLKGELPAGPFFNTISPSYLTGNPSLCGAAVKKSCPSVLPKPIVLNPNTTSDYAPGSLTPNVGHKRIILSISALIAIGAAAVIVIGVIAITVLNLHVRSSASQAPAALTFSAGEEFSHSPTTDANSGKLVMFSGEPDFSTGAHALLNKDCELGRGGFGAVYQTVLRDGHAVAIKKLTVSSLVKSQEDFEREVKKLGKVRHQNLVALEGYYWTPSLQLLIYEFVSGGSLYKHLHDGSSGNFLSWNERFHIILGTAKALAHLHHTNIIHYNIKSTNVLIDGYGEAKVGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGRVEECIDGRLQGKFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPSEGQEELG 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1706 976 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 770 971 - -
Prci2g1706 976 Gene3D Ribonuclease Inhibitor 33 190 IPR032675 -
Prci2g1706 976 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 33 311 - -
Prci2g1706 976 Gene3D Ribonuclease Inhibitor 312 586 IPR032675 -
Prci2g1706 976 ProSitePatterns Protein kinases ATP-binding region signature. 699 722 IPR017441 GO:0005524
Prci2g1706 976 SUPERFAMILY RNI-like 272 573 - -
Prci2g1706 976 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 312 586 - -
Prci2g1706 976 CDD STKc_IRAK 699 965 - -
Prci2g1706 976 Pfam Leucine rich repeat 198 256 IPR001611 GO:0005515
Prci2g1706 976 Pfam Leucine rich repeat 125 185 IPR001611 GO:0005515
Prci2g1706 976 Pfam Leucine rich repeat 394 453 IPR001611 GO:0005515
Prci2g1706 976 Gene3D Phosphorylase Kinase; domain 1 686 769 - -
Prci2g1706 976 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Prci2g1706 976 PANTHER LEUCINE RICH REPEAT KINASE 2 242 963 - -
Prci2g1706 976 Gene3D Transferase(Phosphotransferase) domain 1 770 974 - -
Prci2g1706 976 SUPERFAMILY Protein kinase-like (PK-like) 697 960 IPR011009 -
Prci2g1706 976 SUPERFAMILY L domain-like 48 378 - -
Prci2g1706 976 Gene3D Ribonuclease Inhibitor 269 311 IPR032675 -
Prci2g1706 976 Gene3D Ribonuclease Inhibitor 191 268 IPR032675 -
Prci2g1706 976 Pfam Protein tyrosine and serine/threonine kinase 695 961 IPR001245 GO:0004672|GO:0006468
Prci2g1706 976 ProSiteProfiles Protein kinase domain profile. 693 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1706 976 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 687 769 - -
Prci2g1706 976 PRINTS Leucine-rich repeat signature 126 139 - -
Prci2g1706 976 PRINTS Leucine-rich repeat signature 440 453 - -
Prci2g1706 976 SMART LRR_typ_2 392 416 IPR003591 -
Prci2g1706 976 SMART LRR_typ_2 292 316 IPR003591 -
Prci2g1706 976 SMART LRR_typ_2 123 147 IPR003591 -
Prci2g1706 976 SMART LRR_typ_2 196 219 IPR003591 -
Prci2g1706 976 SMART LRR_typ_2 536 560 IPR003591 -
Prci2g1706 976 SMART LRR_typ_2 220 244 IPR003591 -
Prci2g1706 976 SMART LRR_typ_2 440 464 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1706 Prci-Chr2 12648836 12653165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1706 8 976 Receptor kinase-like Gene Family AT3G56370 68.070 0.0 1278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Prci2g1706 PK_Tyr_Ser-Thr 3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1706 - - gmx:100791629 1509.97