Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1704 ATGGCTTCTTCTTCCTCCTCACCAAATTGGGTCATGGAAAATGGTGTTATGCCCCACGTTTTAGCTGTTGATGACAACCTCATTGACCGCAAACTTGTTGAGAAGCTCCTCAAGAATTCTTCTTGCAAAGTGACAACTGCCGAAAATGGACCGAGGGCATTGGAGTTTCTGGGACTGGCAAGTGATGAAGAAGACACCTTGAAGGGCACTGGATCCAAAGTGAATATGATTATCACAGACTACTGTATGCCTGGGATGACAGGATATGAGCTGCTTAAGAAAATAAAGAAATCATCAATCATGAAGGAGGTTCCAGTGGTGATCATGTCATCTGAGAACATCCCAACAAGGGTGAACAAGTGCTTGGAGGAAGGTGCTCAGATGTTCATCCAAAAGCCCCTCAAGCAATCTGATGTAAAGAAGCTGACATGTCAACTAACGAATTGCAGAGGCTAG 456 0.4452 MASSSSSPNWVMENGVMPHVLAVDDNLIDRKLVEKLLKNSSCKVTTAENGPRALEFLGLASDEEDTLKGTGSKVNMIITDYCMPGMTGYELLKKIKKSSIMKEVPVVIMSSENIPTRVNKCLEEGAQMFIQKPLKQSDVKKLTCQLTNCRG 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1704 151 Pfam Response regulator receiver domain 20 141 IPR001789 GO:0000160
Prci2g1704 151 SUPERFAMILY CheY-like 17 146 IPR011006 -
Prci2g1704 151 CDD REC_typeA_ARR 20 142 - -
Prci2g1704 151 Gene3D - 16 149 - -
Prci2g1704 151 SMART REC_2 18 143 IPR001789 GO:0000160
Prci2g1704 151 FunFam Two-component response regulator ORR5 18 149 - -
Prci2g1704 151 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 146 IPR045279 GO:0009736
Prci2g1704 151 ProSiteProfiles Response regulatory domain profile. 19 147 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1704 Prci-Chr2 12613848 12615663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1704 19 150 Response Regulator Gene Family AT3G56380 73.684 3.97e-66 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci2g1704 Response_reg 3.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1704 K14492 - qsa:O6P43_020091 244.588