Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1702 ATGGACGACGACGTTAGTTGTTTGATCCAGAGGGCTTGCGAGTTAGCCAGAGACCTTGAATCGAACCTGCCCAGCCAATCTGCTGATTCAGTGTTGAGCTGCGTTGATGAGATTGTGGAGAAACTTAATGCTGCCAAAGCGAGGCTGTTGGTGCCGCCTCATCGTGAAGATGAAGCTGCAGTGAAGCAAGAAATGATACGGCATCATCATCCTCAAATGGCGCCAGCAACTTCTTCGTTTTTACAAGAATGGCTATCTGTGAGCCGTCAGTTTGTCTCAATGCCGCAGCTTCAAGCTCCGACGAGGACGCCGGCGCCGCCGAGGGGTGCCCTGCAGATCATGACTGACTCGGGTCCGAGAGATGTAGAAGCTTCTGCAGAAGGTGATGTCGAAGCATCTCCTTCTCGACGCCGAAAAAGTAGCAGGAAGGATGATGCAGAGAAGACAACAATGATGGTTCCAGCAGTTCAGTTTGGGAACACAGATGTGCCTCCAGAGGATGGCTTCACTTGGAGAAAATATGGCCAAAAAGAGATCCTAGGCTCTAATTACCCCAGGAGTTACTTCAGGTGCACGCACCAGAAATTATATCAATGCCCAGCGAAGAAACAAGTGCAGCGTCTGGATAATAACCCTAATATGTTTGCAGTAACATATAGAGGTAGCCACACGTGCCACATGTCATCCACAGCTCCATCTTCATCAGTTCCCCCACAACTTATGATCACACAGTCACATGACATCACCCACACTAATAATCCCGGCAGTACTATTGCTTCTTCCCAGTTGTCTCCTTCTTCTACTTCCGTTTCTGGTTGGTTGTCTTCCGTCCACCTCGGCCTCCTTCCGAGTGGTTCAGGCGTGGTTCCAGCCGGTACGGCAGCCGGTGGCAGCGCCGGCCCCTCCTCGTCGAGATTCGGTGCTGATTACCCGGTGGCTGATATGGCTGACGTCATGTTTAACTCAGGTTCTAGCAGTGGTAACAGCATGGAGTCTCTCTTCCCTTCAGCTGAAGAGAAATGGGAAGCAGGCGACAAGAAAAGCTAA 1047 0.5091 MDDDVSCLIQRACELARDLESNLPSQSADSVLSCVDEIVEKLNAAKARLLVPPHREDEAAVKQEMIRHHHPQMAPATSSFLQEWLSVSRQFVSMPQLQAPTRTPAPPRGALQIMTDSGPRDVEASAEGDVEASPSRRRKSSRKDDAEKTTMMVPAVQFGNTDVPPEDGFTWRKYGQKEILGSNYPRSYFRCTHQKLYQCPAKKQVQRLDNNPNMFAVTYRGSHTCHMSSTAPSSSVPPQLMITQSHDITHTNNPGSTIASSQLSPSSTSVSGWLSSVHLGLLPSGSGVVPAGTAAGGSAGPSSSRFGADYPVADMADVMFNSGSSSGNSMESLFPSAEEKWEAGDKKS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1702 348 MobiDBLite consensus disorder prediction 319 333 - -
Prci2g1702 348 SUPERFAMILY WRKY DNA-binding domain 162 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1702 348 Pfam WRKY DNA -binding domain 166 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1702 348 ProSiteProfiles WRKY domain profile. 166 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1702 348 Gene3D WRKY domain 151 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1702 348 MobiDBLite consensus disorder prediction 98 152 - -
Prci2g1702 348 MobiDBLite consensus disorder prediction 122 149 - -
Prci2g1702 348 MobiDBLite consensus disorder prediction 318 348 - -
Prci2g1702 348 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 238 IPR044810 GO:0003700
Prci2g1702 348 SMART WRKY_cls 165 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1702 Prci-Chr2 12595832 12599116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1702 3 335 WRKY Transcription Factor Family AT2G40740 36.070 8.44e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci2g1702 WRKY 7.2e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1702 - - pcin:129297979 614.764