Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1701 ATGGACGACGACGTTAGTTGTTTGATCCAGAGGGCTTGCGAGTTAGCCAGAGACCTTGAATCGAACCTGCCCAGCCAATCTGCTGATTCAGTGTTGAGCTGCGTTGATGAGATTGTGGAGAAACTTAATGCTGCCAAAGCGAGGCTGTTGGTGCCGCCTCATCGTGAAGATGAAGCTGCAGTGAAGCAAGAAATGATACGGCATCATCATCCTCAAATGGCGCCAGCAACTTCTTCGTTTTTACAAGAATGGCTATCTGTGAGCCGTCAGTTTGTCTCAATGCCGCAGCTTCAAGCTCCGACGAGGACGCCGGCGCCGCCGAGGGGTGCCCTGCAGATCATGACTGACTCGGGTCCGAGAGATGTAGAAGCTTCTGCAGAAGGTGATGTCGAAGCATCTCCTTCTCGACGCCGAAAAAGCAGGAAGGATGATGCAGAGAAGACAACAATGATGGTTCCAGCAGTTCAGTTTGGGAACACAGATGTGCCTCCAGAGGATGGCTTCACTTGGAGAAAATATGGCCAAAAAGAGATCCTAGGCTCTAATTACCCCAGGAGTTACTTCAGGTGCACGCACCAGAAATTATATCAATGCCCAGCGAAGAAACAAGTGCAGCGTCTGGATAATAACCCTAATATGTTTGCAGTAACATATAGAGGTAGCCACACGTGCCACATGTCATCCACAGCTCCATCTTCATCAGTTCCCCCACAACTTATGATCACACAGTCACATGACATCACCCACACTAATAATCCCGGCAGTACTATTGCTTCTTCCCAGTTGTCTCCTTCTTCTACTTCCGTTTCTGGTTGGTTGTCTTCCGTCCACCTCGGCCTCCTTCCGAGTGGTTCAGGCGTGGTTCCAGCCGGTACGGCAGCCGGTGGCAGCGCCGGCCCCTCCTCGTCGAGATTCGGTGCTGATTACCCGGTGGCTGATATGGCTGACGTCATGTTTAACTCAGGTTCTAGCAGTGGTAACAGCATGGAGTCTCTCTTCCCTTCAGCTGAAGAGAAATGGGAAGCAGGCGACAAGAAAAGCTAA 1044 0.5096 MDDDVSCLIQRACELARDLESNLPSQSADSVLSCVDEIVEKLNAAKARLLVPPHREDEAAVKQEMIRHHHPQMAPATSSFLQEWLSVSRQFVSMPQLQAPTRTPAPPRGALQIMTDSGPRDVEASAEGDVEASPSRRRKSRKDDAEKTTMMVPAVQFGNTDVPPEDGFTWRKYGQKEILGSNYPRSYFRCTHQKLYQCPAKKQVQRLDNNPNMFAVTYRGSHTCHMSSTAPSSSVPPQLMITQSHDITHTNNPGSTIASSQLSPSSTSVSGWLSSVHLGLLPSGSGVVPAGTAAGGSAGPSSSRFGADYPVADMADVMFNSGSSSGNSMESLFPSAEEKWEAGDKKS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1701 347 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 237 IPR044810 GO:0003700
Prci2g1701 347 SMART WRKY_cls 164 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1701 347 MobiDBLite consensus disorder prediction 317 347 - -
Prci2g1701 347 Pfam WRKY DNA -binding domain 165 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1701 347 SUPERFAMILY WRKY DNA-binding domain 161 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1701 347 MobiDBLite consensus disorder prediction 122 148 - -
Prci2g1701 347 ProSiteProfiles WRKY domain profile. 165 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1701 347 MobiDBLite consensus disorder prediction 318 332 - -
Prci2g1701 347 Gene3D WRKY domain 150 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1701 347 MobiDBLite consensus disorder prediction 98 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1701 Prci-Chr2 12595832 12599116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1701 3 334 WRKY Transcription Factor Family AT2G40740 36.070 1.49e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci2g1701 WRKY 7.1e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1701 - - pcin:129297979 613.224