Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1700 ATGGACGACGACGTTAGTTGTTTGATCCAGAGGGCTTGCGAGTTAGCCAGAGACCTTGAATCGAACCTGCCCAGCCAATCTGCTGATTCAGTGTTGAGCTGCGTTGATGAGATTGTGGAGAAACTTAATGCTGCCAAAGCGAGGCTGTTGGTGCCGCCTCATCGTGAAGATGAAGCTGCAGTGAAGCAAGAAATGATACGGCATCATCATCCTCAAATGGCGCCAGCAACTTCTTCGTTTTTACAAGAATGGCTATCTGTGAGCCGTCAGTTTGTCTCAATGCCGCAGCTTCAAGCTCCGACGAGGACGCCGGCGCCGCCGAGGGGTGCCCTGCAGATCATGACTGACTCGGGTCCGAGAGATGTAGAAGCTTCTGCAGAAGGTGATGTCGAAGCATCTCCTTCTCGACGCCGAAAAAGGAAGGATGATGCAGAGAAGACAACAATGATGGTTCCAGCAGTTCAGTTTGGGAACACAGATGTGCCTCCAGAGGATGGCTTCACTTGGAGAAAATATGGCCAAAAAGAGATCCTAGGCTCTAATTACCCCAGGAGTTACTTCAGGTGCACGCACCAGAAATTATATCAATGCCCAGCGAAGAAACAAGTGCAGCGTCTGGATAATAACCCTAATATGTTTGCAGTAACATATAGAGGTAGCCACACGTGCCACATGTCATCCACAGCTCCATCTTCATCAGTTCCCCCACAACTTATGATCACACAGTCACATGACATCACCCACACTAATAATCCCGGCAGTACTATTGCTTCTTCCCAGTTGTCTCCTTCTTCTACTTCCGTTTCTGGTTGGTTGTCTTCCGTCCACCTCGGCCTCCTTCCGAGTGGTTCAGGCGTGGTTCCAGCCGGTACGGCAGCCGGTGGCAGCGCCGGCCCCTCCTCGTCGAGATTCGGTGCTGATTACCCGGTGGCTGATATGGCTGACGTCATGTTTAACTCAGGTTCTAGCAGTGGTAACAGCATGGAGTCTCTCTTCCCTTCAGCTGAAGAGAAATGGGAAGCAGGCGACAAGAAAAGCTAA 1041 0.5091 MDDDVSCLIQRACELARDLESNLPSQSADSVLSCVDEIVEKLNAAKARLLVPPHREDEAAVKQEMIRHHHPQMAPATSSFLQEWLSVSRQFVSMPQLQAPTRTPAPPRGALQIMTDSGPRDVEASAEGDVEASPSRRRKRKDDAEKTTMMVPAVQFGNTDVPPEDGFTWRKYGQKEILGSNYPRSYFRCTHQKLYQCPAKKQVQRLDNNPNMFAVTYRGSHTCHMSSTAPSSSVPPQLMITQSHDITHTNNPGSTIASSQLSPSSTSVSGWLSSVHLGLLPSGSGVVPAGTAAGGSAGPSSSRFGADYPVADMADVMFNSGSSSGNSMESLFPSAEEKWEAGDKKS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1700 346 Gene3D WRKY domain 149 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1700 346 SMART WRKY_cls 163 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1700 346 MobiDBLite consensus disorder prediction 98 148 - -
Prci2g1700 346 MobiDBLite consensus disorder prediction 122 147 - -
Prci2g1700 346 SUPERFAMILY WRKY DNA-binding domain 160 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1700 346 MobiDBLite consensus disorder prediction 318 346 - -
Prci2g1700 346 ProSiteProfiles WRKY domain profile. 164 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1700 346 Pfam WRKY DNA -binding domain 164 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1700 346 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 236 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1700 Prci-Chr2 12595832 12599116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1700 3 333 WRKY Transcription Factor Family AT2G40740 36.657 6.38e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci2g1700 WRKY 7.1e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1700 - - pcin:129297979 617.846