Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g1700 | ATGGACGACGACGTTAGTTGTTTGATCCAGAGGGCTTGCGAGTTAGCCAGAGACCTTGAATCGAACCTGCCCAGCCAATCTGCTGATTCAGTGTTGAGCTGCGTTGATGAGATTGTGGAGAAACTTAATGCTGCCAAAGCGAGGCTGTTGGTGCCGCCTCATCGTGAAGATGAAGCTGCAGTGAAGCAAGAAATGATACGGCATCATCATCCTCAAATGGCGCCAGCAACTTCTTCGTTTTTACAAGAATGGCTATCTGTGAGCCGTCAGTTTGTCTCAATGCCGCAGCTTCAAGCTCCGACGAGGACGCCGGCGCCGCCGAGGGGTGCCCTGCAGATCATGACTGACTCGGGTCCGAGAGATGTAGAAGCTTCTGCAGAAGGTGATGTCGAAGCATCTCCTTCTCGACGCCGAAAAAGGAAGGATGATGCAGAGAAGACAACAATGATGGTTCCAGCAGTTCAGTTTGGGAACACAGATGTGCCTCCAGAGGATGGCTTCACTTGGAGAAAATATGGCCAAAAAGAGATCCTAGGCTCTAATTACCCCAGGAGTTACTTCAGGTGCACGCACCAGAAATTATATCAATGCCCAGCGAAGAAACAAGTGCAGCGTCTGGATAATAACCCTAATATGTTTGCAGTAACATATAGAGGTAGCCACACGTGCCACATGTCATCCACAGCTCCATCTTCATCAGTTCCCCCACAACTTATGATCACACAGTCACATGACATCACCCACACTAATAATCCCGGCAGTACTATTGCTTCTTCCCAGTTGTCTCCTTCTTCTACTTCCGTTTCTGGTTGGTTGTCTTCCGTCCACCTCGGCCTCCTTCCGAGTGGTTCAGGCGTGGTTCCAGCCGGTACGGCAGCCGGTGGCAGCGCCGGCCCCTCCTCGTCGAGATTCGGTGCTGATTACCCGGTGGCTGATATGGCTGACGTCATGTTTAACTCAGGTTCTAGCAGTGGTAACAGCATGGAGTCTCTCTTCCCTTCAGCTGAAGAGAAATGGGAAGCAGGCGACAAGAAAAGCTAA | 1041 | 0.5091 | MDDDVSCLIQRACELARDLESNLPSQSADSVLSCVDEIVEKLNAAKARLLVPPHREDEAAVKQEMIRHHHPQMAPATSSFLQEWLSVSRQFVSMPQLQAPTRTPAPPRGALQIMTDSGPRDVEASAEGDVEASPSRRRKRKDDAEKTTMMVPAVQFGNTDVPPEDGFTWRKYGQKEILGSNYPRSYFRCTHQKLYQCPAKKQVQRLDNNPNMFAVTYRGSHTCHMSSTAPSSSVPPQLMITQSHDITHTNNPGSTIASSQLSPSSTSVSGWLSSVHLGLLPSGSGVVPAGTAAGGSAGPSSSRFGADYPVADMADVMFNSGSSSGNSMESLFPSAEEKWEAGDKKS | 346 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g1700 | 346 | Gene3D | WRKY domain | 149 | 226 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Prci2g1700 | 346 | SMART | WRKY_cls | 163 | 225 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Prci2g1700 | 346 | MobiDBLite | consensus disorder prediction | 98 | 148 | - | - | |
Prci2g1700 | 346 | MobiDBLite | consensus disorder prediction | 122 | 147 | - | - | |
Prci2g1700 | 346 | SUPERFAMILY | WRKY DNA-binding domain | 160 | 225 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Prci2g1700 | 346 | MobiDBLite | consensus disorder prediction | 318 | 346 | - | - | |
Prci2g1700 | 346 | ProSiteProfiles | WRKY domain profile. | 164 | 226 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Prci2g1700 | 346 | Pfam | WRKY DNA -binding domain | 164 | 223 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Prci2g1700 | 346 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 9 | 236 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci2g1700 | Prci-Chr2 | 12595832 | 12599116 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci2g1700 | 3 | 333 | WRKY Transcription Factor Family | AT2G40740 | 36.657 | 6.38e-56 | 182 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Prci2g1700 | WRKY | 7.1e-27 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g1700 | - | - | pcin:129297979 | 617.846 |