Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1699 ATGGCCACTGTTTCCCCGGAGATGAAGATGAAAAAGGAGAAGATTGATGTGATCGGAGAGCTTGTCCAGGGTTACCAGTCTGCTTCCCAGCTCAAGTTTCTGCTTCAGAAGCCTTTCCAGGCTGATGCATCTCTCTCTGCTCATCAACATTTGGCGATTGTTCTTAGATCCTTCACCCACTCTCTTTCTCTTCTCACTTCTTCTTCCTCCGACGAACTCCACGTCGCTCAGGATCTGGTTGTTTCCGGTGGGAATGATCCTCCGCCGCCGCCGGACTATTGCCTTGACGGCAAGTCCCCGGATGCGAGGGAGAGCAGGGGGAGATCGGGGCCGGCCACCAAGAGTCGGAGAGGCTGCTACAAAAGAAGGAGGGCTGCGCAAGCGTGGACAGTAGTCTCTTCCTCAGCCGATGATAATTATGCATGGAGAAAGTACGGACAGAAGGAAATCCTTAATTTCAAATTTCCCAGGAGTTACTTGAGGTGCACTCGCAAGTATGTACAAGGTTGTAGAGCGGTCAAGCAGGTGCAGCGAATCCAAGAGAATCCTGATATGTATCAAATAACGTACATCGGATATCACACATGTAAAGACATCCCTAAGACACCCCTGGTGGTCACAGAATCTGGTAACTGGGGATCATCATTTCTCGCAGACTCAGAGATTCCAAACGAAGAAGCCAAGGTCATCGATCCCATAAAACAAGAGCATCCTAAGGAGGAGACACAGACGAGTGATTTCACAGACAGCTGCTTGGACCCCAGTTTATGGTCGGATCTCAAAGATCTGTCCGAGGCTGCAATAGTAGGGCCCTTGGGGTCTGATGATAATGCAGATACTGTGTATTCATGTTCTGGTGGCTCTTTGGATTTCGGGGTTGATGATTCTGTTCATTTTGGCTCCGATTATTTCCCCTTCGATGATCCTGATGATGATGAGCTTTAG 945 0.4921 MATVSPEMKMKKEKIDVIGELVQGYQSASQLKFLLQKPFQADASLSAHQHLAIVLRSFTHSLSLLTSSSSDELHVAQDLVVSGGNDPPPPPDYCLDGKSPDARESRGRSGPATKSRRGCYKRRRAAQAWTVVSSSADDNYAWRKYGQKEILNFKFPRSYLRCTRKYVQGCRAVKQVQRIQENPDMYQITYIGYHTCKDIPKTPLVVTESGNWGSSFLADSEIPNEEAKVIDPIKQEHPKEETQTSDFTDSCLDPSLWSDLKDLSEAAIVGPLGSDDNADTVYSCSGGSLDFGVDDSVHFGSDYFPFDDPDDDEL 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1699 314 MobiDBLite consensus disorder prediction 80 119 - -
Prci2g1699 314 Pfam WRKY DNA -binding domain 137 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1699 314 Gene3D WRKY domain 123 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1699 314 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 24 236 IPR044810 GO:0003700
Prci2g1699 314 SMART WRKY_cls 136 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1699 314 MobiDBLite consensus disorder prediction 97 111 - -
Prci2g1699 314 SUPERFAMILY WRKY DNA-binding domain 133 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1699 314 ProSiteProfiles WRKY domain profile. 137 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1699 Prci-Chr2 12592392 12595620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1699 11 203 WRKY Transcription Factor Family AT3G56400 42.640 5.95e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci2g1699 WRKY 9.6e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1699 - - gmx:100778162 263.462