Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1683 ATGTTCGAGTCCTTAATTTCTGCAATTGTTTCACTAAGCTTCTTACTGTTCTTCTCTGGCTCCACTGTAGCTGATCTGGACTCTGATAGACAAGCTCTCTTAGAGTTTGCTTCTAGTGTCCCGCATGCCCGAAGACTCAACTGGAATGATTCTTCTTCAATTTGCACCTCATGGGTGGGTGTGACTTGTAACTCAGATGAAACTCGGGTCATTGCTATCCATCTTCCAGGAATTGGCCTCAAAGGTCACATTCCAGAGAACAGCATAGGGAAACTAGACGCCCTTATGGTCCTGAGCCTTCACACCAATGGCCTTAATGGGAATCTTCCTGAAGACATCCTCTCCATTCCTTCACTCGAGTATGTTCACCTCCAGCACAATAACTTCAAGGGTCCAATCCCTCTCTCTGTCTCTCCCAAACTCGTTGCACTTGATATTTCTTTCAACTCCTTCTCTGGCACTATCCCACCTACATTTGTCAATCTCAGAAGACTTGCCTGGTTGTATTTTCAAAACAATTCCATCTCTGGACATATCCCAGATTTCAACCTCCCGAGGCTCAAATTTCTCAATTTAAGTTATAACAACTTGAGTGGCTCAGTTCCAAATTCCATCCAAAAATTCCCCCTCACTTCTTTTGTTGGGAACTCTTACTTATGTGGGCCACCTCTGAATCATTGCTCTGCGATTACCCCTTCTCGATCACCTCCCTCTGGTTATCCCTCGGTCACTCCAGCAAATCCACAAAGTCAAAAGGCTACCAACTCAAAGAAAAGATTTGGATTGGCTTTCATACTTGCTTTAGTTATTGGGGGATGTGCATGCCTCGCTCTCCTAGTTTTGGTAATCTCTTTGTGCTGTTGTAAGAAGAAAAACGGTCAAAGCAGAGGCATACTGAAAGCAAAGGCAGCTTGTGCAGGAAAGAACGAGATTTCGAAGAGTTTTGGAAGTGGAGTACAAGCGGCTGAGAAGAACAAGTTGTTCTTCTTTAGAGGTTGCTCTTATACGTTTGACCTTGAGGATTTGCTAAAGGCCTCAGCTGAAGTTCTTGGAAAGGGAAGTTATGGAACAGCTTACAAGGCTGTTTTGGAGGAGGGAACAACGGTGGTGGTCAAGAGGCTGAGGGAGGTTGTGGTCGGAAAGAAGGAGTTTGAACAGCAGATGGATATTGTAGGAAGAATCGGAAGCCATCCCAATGTTATGCCTCTTCAAGCTTATTATTATTCTAAAGATGAGAAACTTCTGGTTTGCAGCTTCATGCCAGGCGGAAGCTTATTTGCCTCATTGCATGGAAACAGGGGTGAAGGAAGAACTCCATTAGACTGGGATGCAAGAATGAAGATCTCACTTGGAGGTGCCAAGGGAATAGCCTTCATACACTCTGAAGGGGGTCCAAAATTCACGCACGGCAACATCAAGTCCACCAATGTCCTCCTAACACAAGACCTCGATTGCTGCATCTCCGACGTCGGATTGCCTCCTCTGATGAACACTCCGGCAACCATGTCCAGATCCAACGGCTATCGCGCTCCAGAAGTAACGGACGCCCGAAAAATCACCCATAAATCCGATGTCTACAGCTTCGGGGTGCTTCTCCTGGAAATGCTGACGGGGAAATGCCCAATGAGATACCCTGGCCATGACGAGGTGGTGGATCTCCCGAGGTGGGTGAGATCCGTCGTTCGCGAGGAATGGACGGCCGAGGTGTTCGACGAGGAGCTACTGAGAGGGCGATATGTGGAAGAGGAAATGGTGCAGATGCTTCAGATTGCGCTGGCATGCGTGGTGAAGGTGCCGGACATGAGGCCTAGGATGGACGAAATTGTGAGAATGATGGAGGAGATCAGGCAGCCGGAATTGAAGAACCGGCCTTCCTCCGAGTCCGAGTCCAATTTACAGACACCTTGA 1908 0.4743 MFESLISAIVSLSFLLFFSGSTVADLDSDRQALLEFASSVPHARRLNWNDSSSICTSWVGVTCNSDETRVIAIHLPGIGLKGHIPENSIGKLDALMVLSLHTNGLNGNLPEDILSIPSLEYVHLQHNNFKGPIPLSVSPKLVALDISFNSFSGTIPPTFVNLRRLAWLYFQNNSISGHIPDFNLPRLKFLNLSYNNLSGSVPNSIQKFPLTSFVGNSYLCGPPLNHCSAITPSRSPPSGYPSVTPANPQSQKATNSKKRFGLAFILALVIGGCACLALLVLVISLCCCKKKNGQSRGILKAKAACAGKNEISKSFGSGVQAAEKNKLFFFRGCSYTFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLREVVVGKKEFEQQMDIVGRIGSHPNVMPLQAYYYSKDEKLLVCSFMPGGSLFASLHGNRGEGRTPLDWDARMKISLGGAKGIAFIHSEGGPKFTHGNIKSTNVLLTQDLDCCISDVGLPPLMNTPATMSRSNGYRAPEVTDARKITHKSDVYSFGVLLLEMLTGKCPMRYPGHDEVVDLPRWVRSVVREEWTAEVFDEELLRGRYVEEEMVQMLQIALACVVKVPDMRPRMDEIVRMMEEIRQPELKNRPSSESESNLQTP 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1683 635 MobiDBLite consensus disorder prediction 616 635 - -
Prci2g1683 635 Pfam Leucine rich repeat 139 197 IPR001611 GO:0005515
Prci2g1683 635 FunFam pollen receptor-like kinase 1 312 419 - -
Prci2g1683 635 Gene3D Transferase(Phosphotransferase) domain 1 420 633 - -
Prci2g1683 635 ProSiteProfiles Protein kinase domain profile. 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1683 635 PANTHER OS05G0588300 PROTEIN 10 627 - -
Prci2g1683 635 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 420 626 - -
Prci2g1683 635 Pfam Protein tyrosine and serine/threonine kinase 348 611 IPR001245 GO:0004672|GO:0006468
Prci2g1683 635 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Prci2g1683 635 SUPERFAMILY Protein kinase-like (PK-like) 348 613 IPR011009 -
Prci2g1683 635 FunFam Leucine-rich repeat receptor-like protein kinase 28 138 - -
Prci2g1683 635 FunFam Leucine-rich repeat receptor-like protein kinase 139 227 - -
Prci2g1683 635 Gene3D Ribonuclease Inhibitor 22 83 IPR032675 -
Prci2g1683 635 Gene3D Ribonuclease Inhibitor 84 233 IPR032675 -
Prci2g1683 635 ProSitePatterns Protein kinases ATP-binding region signature. 350 381 IPR017441 GO:0005524
Prci2g1683 635 SUPERFAMILY L domain-like 39 223 - -
Prci2g1683 635 Gene3D Phosphorylase Kinase; domain 1 310 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1683 Prci-Chr2 12517500 12520653 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1683 5 630 Receptor kinase-like Gene Family AT5G58300 58.824 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci2g1683 Pkinase 4.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1683 - - aprc:113868460 998.038