Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1676 ATGGAGCGAATTTCCACGTGGGTAGTCCTCCTTTCATGGATTTTCCTCATTAACGTGACACTTTGTGTGGAGGACGAGGTCAAGAGCTCAATGATAAGCTTCCTTGCGAAACTATCAAGCCAACAGAATATTTCTGCTTTGAATTGGAAGGCAGATTCTGATCCTTGTAAGGACCTCTGGCAAGGTGTAGTCTGCGATTCTCGTAATGCATCAGTACGGAGGCTATTTCTCGACAGGCTGAATTTATCTGGAACTCTTGATGCTGCTATTCTCTGCAATGTTCAACCTCTTGCCGGTTCTTTAATCATTCTTGCTCTTGGTGGAAACGCCATCAGTGGGGTGATATCAGATGAGATTGGAAACTGCAAAAAGCTAACTCGCTTGTACGTTGGGGGAAATCAACTTTCTGGGGAACTTCCTCCTTCACTTGCCTTGCTAAATAATCTGAAAAGGCTTGACATTTCGAATAATAAGTTTTCTGGTCACTTGCCAGGCTTGTCCAGAATCTCAGGGTTGAATGTGCTCCTCGCCCAGAACAATAACCTCAGTGGGGCGATACCCGGGTTTGATTTTTCCAACTTTTATAAGTTCAATGTTTCTTGTAACAACTTTAGTGGCCAAATTCCAGATGTTCATGACCGTTTCTTTGAAGACAGCTTTTTGGGCAATCCTGAACTGTGTGGAAAACCACTGCAAAAAAACTGTCCGCTAATTCATACTCTTGCTGTCAAATCAGTAGAATCAAATGGGTCAAATGAAATGAATGGATCGAATGGATCAAAGGGTCCTTCTAAAGACCAAATCCTAATGTATTCAGGATATGCTGCATTGGTTTTGGTATTTATCCTTTTCGTACTTTATAAACTGTGTACAAGGAACAAAATAGAAAAGGCTGAAGCTGGAGCATCAAATAAGGTAGCAGCAAGTAATGATCATGATGTGTTTGACAAACCTAGTAATGCTTCAAGTGGACAAAAATCAGTCGTAAGCAGATCCGAGATTTCAGTCAATTCTGAAAGTGGGATGGTTTCACAATCACTTGTAGTTCTTGCACAACCAGTGATAAGTGAGTTTAGACTTGAGGACTTGCTGAGAGCCCCAGCAGAACTGCTTGGCAGAGGCAAGCATGGTAGTCTTTATAAGGTGATGCTGGACAACGGCAAGACGGTGGTTGTAAAAAGGATCAAGGACTTGGCTACTTCCAGTCATGACTTCAAGCAAAAAATGGAGATTCTGGGTCAAGTGAAGCACCCTTACTTACTCCCACCACTTGCTTTCTATTGCTCCAATCAAGAGAAGCTTCTGGTCTACGAATTCCAAGAAAATGGAAGCTTATTCAAGCTTCTTCATGGCGAGTCCAGAGGATTTGATTGGACCAGCAGGCTTGGGATTGCAGCAATGATAGCAGAGGGATTGGCTTTCATGCATCAAAAGGTTGGGGAGAAAGGTATTGCACATGGAAACCTGAAATCCTCCAACATTTTGCTGAGCTATAACATGGAAGCACGCATAAGTGAGTATGGTGTGATGAATATGGACGATGAACTGAGCTCATCTTCTGCAAGTCCTCGTCCTACTGGTTCTGGAGCACCAATTGTGTTGAAGGCAGATGTGTATGGATTTGGGGTGATACTTCTTGAGCTACTTACAGGGAAGTGTGTGAAGAACGATGGGATTGACTTGGCGGAGTGGGTCCAATCTGTTGTGAGGGAAGAATGGACAGGCGAGGTGTTTGACAAGGCACTGATATCAGAGTATGCCAGTGAAGAGAGGCTGGTGAATCTGCTTCGAGTGGCTATCAAATGTGTTCATCGTTCACCAGAAGCTAGGCCAAGTATGAATCAGGTGGCTCTCATGGTTAACACTGTCAAAGAGGAAGAAGAGAAATCATTGATCTATGAGGTGTGA 1908 0.4345 MERISTWVVLLSWIFLINVTLCVEDEVKSSMISFLAKLSSQQNISALNWKADSDPCKDLWQGVVCDSRNASVRRLFLDRLNLSGTLDAAILCNVQPLAGSLIILALGGNAISGVISDEIGNCKKLTRLYVGGNQLSGELPPSLALLNNLKRLDISNNKFSGHLPGLSRISGLNVLLAQNNNLSGAIPGFDFSNFYKFNVSCNNFSGQIPDVHDRFFEDSFLGNPELCGKPLQKNCPLIHTLAVKSVESNGSNEMNGSNGSKGPSKDQILMYSGYAALVLVFILFVLYKLCTRNKIEKAEAGASNKVAASNDHDVFDKPSNASSGQKSVVSRSEISVNSESGMVSQSLVVLAQPVISEFRLEDLLRAPAELLGRGKHGSLYKVMLDNGKTVVVKRIKDLATSSHDFKQKMEILGQVKHPYLLPPLAFYCSNQEKLLVYEFQENGSLFKLLHGESRGFDWTSRLGIAAMIAEGLAFMHQKVGEKGIAHGNLKSSNILLSYNMEARISEYGVMNMDDELSSSSASPRPTGSGAPIVLKADVYGFGVILLELLTGKCVKNDGIDLAEWVQSVVREEWTGEVFDKALISEYASEERLVNLLRVAIKCVHRSPEARPSMNQVALMVNTVKEEEEKSLIYEV 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1676 635 Gene3D Transferase(Phosphotransferase) domain 1 441 634 - -
Prci2g1676 635 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Prci2g1676 635 Gene3D Phosphorylase Kinase; domain 1 330 439 - -
Prci2g1676 635 Gene3D Ribonuclease Inhibitor 25 193 IPR032675 -
Prci2g1676 635 SUPERFAMILY Protein kinase-like (PK-like) 368 619 IPR011009 -
Prci2g1676 635 ProSiteProfiles Protein kinase domain profile. 365 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1676 635 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 97 186 - -
Prci2g1676 635 Gene3D Ribonuclease Inhibitor 194 237 IPR032675 -
Prci2g1676 635 PANTHER OS05G0588300 PROTEIN 14 625 - -
Prci2g1676 635 SUPERFAMILY L domain-like 49 228 - -
Prci2g1676 635 Pfam Protein tyrosine and serine/threonine kinase 369 617 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1676 Prci-Chr2 12480161 12482459 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1676 53 616 Receptor kinase-like Gene Family AT1G48480 36.348 1.56e-98 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci2g1676 PK_Tyr_Ser-Thr 4.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1676 - - gmx:100813796 783.867