Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1638 ATGGGTGCGGCTACTACCTGTCATCCGCCGCCACCGCGAGCGGATGAGACGGCTGTGTTGCCTCTGAATTCGCTGCCTCTGGGTTTCAGATTTCGGCCCACCGACGAGGAGCTTGTTGATTTTTACCTGAGACAGAAGATTAATGGTTATGGTGACGAAGTCTGGGTTATCCGGGAAATCGATGTTTGCAAATGGGAGCCCTGGGATTTGCCTGATTTATCGGTGATACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCACAGGACCGCAAGTATCCGAATGGCCATAGATTGAACCGAGCAACAAATCAAGGGTATTGGAAGGCAACTGGCAAGGATCGCAAAATTAAGTCCGGGTCCACGTTGATAGGAATGAAGAAGACTTTAGTCTTCTACAGTGGTCGTGCTCCCAAGGGGAAGAGAACCCATTGGGTTATGCATGAGTACCGTCCCACTCTGAAGGAGCTTGATGGTACCAATCCTGGACAGAATGCCTATGTCCTCTGTCGTTTGTTTAAGAAACAAGATGAGAGTCTTGAAGTTTCAAACTGTGAAGAAGTGGAACGGACTGTGTCAACCCCTACTGCTGCTAATTACTCTCCAGAAGAAATACAGTCTGATGCTGGTGTGGCTGTGGTATCCCCGTCGGTGGCTCCAGAAGATGATAAGCAGCGGATAGCTCCATTCTGTATTTCTGAGAACACTGAAGAAACCACATCTAACGTAATAACATCAGCTGATTGCCATAGTGATGGGGGTGATGCTTGTGACGCACAAAATCAAAATGTAGATAAAACAGCTATAGAGGAGGATCCGCTGTTGAACCTTGATATATTTAATGAACCAATAACTGGATTTGATGACAAGATGTTCTCCCCGTTACATATGCATGTGCTGTCAGAATTTTATGATCCAGTGAGCAATGTATCAGATGGCTATTCTGGGGTGCAACTTTCATATGGCACAAATGAGACAAATTTTTCAGAGTACTTTGACTCATGCATTAATTATGGCGGGTTGTCCTGTGAGGACTACATCAGTCAAAAGCCAACCTCTGGCGTTTTAAATCCTAGGGACTATGGATCTGGCAATGACTCAGATGTGCAAATGGCCAATATGCCGTATCGTCAAGCATTGCATGCTGTGCATCCTGAGGAGGCAATTGAGAACAGGATTCCTTCCATGATAGATACAGCTTCAGAATTTACCGGAGCCATTACGCCTGACCTCAGTGGTTTTGACCAGAAGAGCAATATTGGGATAGTCCAAAGCCATTCTCAGATGGCTTTGCCATCTGATGTTGCTTTTGACCAAGTCTACAGTGTGTTAAATGGTTGTCAGGAACCAAGAAACTACAATACAGTTGTTGGCGGTGATAATGGTGCTGGGACTGGGATCAGGATTAGGACTCGCCAAGGGCGAAATGAAGAGGTAAACATGAACCCTATGATCCAAGGGCAGGGTAATGCTCCCAGAAGAATTCTTCTACTTAAAATTGAGAAAGGTGGGGGTTATGTACAAGAAAACCATGATTCAAAACCAATCATCACAAGGGAGACTGAAGCCTCAGAAAATAATGCTGCAGAAGAGGATGCTAATGCTGAGAGTGAACCCCAGACTCCTGAGTCAGTTGACAGTAATAATATTTCTCAGCAACTTGTTACAAATGAAGATTCTATCTCAGGTTTAAAAGAAACCATGTTGTGCAAATCAGTTAAGGGCACATCAAAGGTTTCTTCTCGTGCCAGGATCCGGTCATCTACCTTGGTATTCTCTGTCAGTTTAATGGCTGCAGTAGTATTCATAGCTAACATATGGGGAGTTATTAAATTTTGA 1839 0.4464 MGAATTCHPPPPRADETAVLPLNSLPLGFRFRPTDEELVDFYLRQKINGYGDEVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATNQGYWKATGKDRKIKSGSTLIGMKKTLVFYSGRAPKGKRTHWVMHEYRPTLKELDGTNPGQNAYVLCRLFKKQDESLEVSNCEEVERTVSTPTAANYSPEEIQSDAGVAVVSPSVAPEDDKQRIAPFCISENTEETTSNVITSADCHSDGGDACDAQNQNVDKTAIEEDPLLNLDIFNEPITGFDDKMFSPLHMHVLSEFYDPVSNVSDGYSGVQLSYGTNETNFSEYFDSCINYGGLSCEDYISQKPTSGVLNPRDYGSGNDSDVQMANMPYRQALHAVHPEEAIENRIPSMIDTASEFTGAITPDLSGFDQKSNIGIVQSHSQMALPSDVAFDQVYSVLNGCQEPRNYNTVVGGDNGAGTGIRIRTRQGRNEEVNMNPMIQGQGNAPRRILLLKIEKGGGYVQENHDSKPIITRETEASENNAAEEDANAESEPQTPESVDSNNISQQLVTNEDSISGLKETMLCKSVKGTSKVSSRARIRSSTLVFSVSLMAAVVFIANIWGVIKF 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1638 612 SUPERFAMILY NAC domain 19 175 IPR036093 GO:0003677|GO:0006355
Prci2g1638 612 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 24 235 - -
Prci2g1638 612 Gene3D NAC domain 34 179 IPR036093 GO:0003677|GO:0006355
Prci2g1638 612 MobiDBLite consensus disorder prediction 533 552 - -
Prci2g1638 612 ProSiteProfiles NAC domain profile. 25 175 IPR003441 GO:0003677|GO:0006355
Prci2g1638 612 Pfam No apical meristem (NAM) protein 26 151 IPR003441 GO:0003677|GO:0006355
Prci2g1638 612 MobiDBLite consensus disorder prediction 521 552 - -
Prci2g1638 612 FunFam Nac domain-containing protein 86 34 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1638 Prci-Chr2 12224439 12227927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1638 11 532 NAC Transcription Factor Family AT1G33060 37.411 2.20e-94 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci2g1638 NAM 5.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1638 - - gmx:100778903 624.394