Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1630 ATGGGTTCAGCCGGCGAGACCCAGATCACCCCAACGCACGTCAACGACGAGGAAGCGAACCTCTTCGCGATGCAATTGGCCAGCGCCTCCGTGCTCCCCATGATTCTGAAATCAGCGCTCGAGCTGGATCTGCTCGAGATCATCGCCAAGGCTGGCCCTAATGCTCAGGCTTCGCCCTCCGACGTTGCCTCTCAGCTGCCGACGAAGAATCCCGACGCGGCGGTGATGCTGGACCGCATGATGCGGCTGTTGGCCAGCTACAACGTCCTGACCTGCTCTGTCCGAACCCTTCCCGACGGCAAGATCGAGAGGCTCTATGGTCTGGCCCCCGTCGCTAAATACTTGGTTAAAAACGAAGACGGCGTCTCTATTGCTCCCCTCAACCTCATGAATCAGGACAAAGTCCTCATGGAGAGCTGGTACTACTTGAAAGACGCGGTTCTGGAAGGAGGGATTCCATTCAACAAGGCACACGGGATGACATCGTTCGAGTACCACGGGAAAGATGGCAGGTTCAACAAGGTCTTCAACAAGGGCATGGCCGACCACTCCACCATCACCATGAAGAAGATTCTGGAGACCTACAACGGCTTTGAGGGCCTCAAGTCTCTCGTCGACGTCGGCGGCGGCACTGGAGCTGTCATCAACATGATCGTCTCCAAGTACCCCTCCATTAAAGGCATTAACTTTGACCTCCCCCATGTCATCCAAGACGCTCCCTCTTATCCAGGTGTGGAGCATGTTGGTGGGGACATGTTCGTCAGTGTTCCAAAAGCTGATGCTGTTTTCATGAAGTGGATATGCCATGACTGGAGTGACGAGCACTGCTTGAAATTCCTAAAGAACTGCTACGACGCGCTTCCGGAGAATGGGAAGGTGATAGTGGCGGAGTGCATTCTTCCGGTGGCTCCGGACTCTAGCTTGGCCACAAAAGGTGTGGTCCACATCGACGTCATCATGCTGGCTCACAACCCTGGTGGCAAAGAGAGGACTGAGAAAGAGTTTGAGGCTTTGGCCAAGGGCGCTGGCTTCCAAGCTTTCCGGGTTGTTTGCTCTGCTTTCAACTCCTATATCATGGAATTCCTGAAGAACCCTTAA 1098 0.5446 MGSAGETQITPTHVNDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPNAQASPSDVASQLPTKNPDAAVMLDRMMRLLASYNVLTCSVRTLPDGKIERLYGLAPVAKYLVKNEDGVSIAPLNLMNQDKVLMESWYYLKDAVLEGGIPFNKAHGMTSFEYHGKDGRFNKVFNKGMADHSTITMKKILETYNGFEGLKSLVDVGGGTGAVINMIVSKYPSIKGINFDLPHVIQDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDEHCLKFLKNCYDALPENGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEKEFEALAKGAGFQAFRVVCSAFNSYIMEFLKNP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1630 365 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Prci2g1630 365 PANTHER O-METHYLTRANSFERASE 23 344 IPR016461 GO:0008168
Prci2g1630 365 CDD AdoMet_MTases 204 295 - -
Prci2g1630 365 Gene3D Vaccinia Virus protein VP39 116 363 IPR029063 -
Prci2g1630 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 363 IPR016461 GO:0008168
Prci2g1630 365 SUPERFAMILY "Winged helix" DNA-binding domain 15 119 IPR036390 -
Prci2g1630 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 360 IPR029063 -
Prci2g1630 365 FunFam Caffeic acid 3-O-methyltransferase 3 115 - -
Prci2g1630 365 PIRSF O-mtase 2 363 IPR016461 GO:0008168
Prci2g1630 365 FunFam Caffeic acid O-methyltransferase 116 363 - -
Prci2g1630 365 Gene3D - 1 115 IPR036388 -
Prci2g1630 365 Pfam O-methyltransferase domain 140 345 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1630 Prci-Chr2 12149129 12153116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1630 1 363 Monolignol Biosynthesis Gene Families AT5G54160 76.033 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1630 K13066 - gmx:100780100 668.692