Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1620 ATGGGCGTGTTTCTACCGAGGAACAAAAATCCAACGTTCTCGTTTATTTTACTGTTCTTTATTCTGGTTCTACAAGACACTAACATCTTGCCCTCGGCTGCTGCTACCAGAAGCAACGTTTACATTGTTCACATGGGAAAGAAGCAGCACGATGATCCAGAGCGCCTCACTGAACTCCATCATGAAACCCTTACATCAGTCATTGGAAGAGAAGAATCCATAGACTCTATGGTGTATAACTACAAACATGGGTTCTCAGGTTTTGCAGCAAGGCTTACAAAAACTCAAGCTAAAATGATTGCAGAGTTACCTAATGTTGTTCAAGTGATGCCCAATAATCTTTATAGGATGCAAACTACCAGAAGCTGGGACTACCTTCAACTACCTTTACATTCTTTCAATAGTCTTCAGCATCAATCCAAGATGGGAGATAGTGCCATCATCGGCCTTCTTGATTCAGGAATATGGCCAGAATCTAAAGCTTTCTCCAATGAAGGTATGGGGCCAATTCCCTCTAGGTGGAGGGGCGTCTGTGAATCAGGAAAACTCTTCGACGCAGCAAGGAGCTGTAACAGAAAATTGATTGGAGCTCGTTATTTTATCAAAGGTCTTCAAGCTGAATATGGACAGCCATTAAATTCTACTGTGTTCCAAGATTACTTGTCCCCAAGAGATGCATCTGGACATGGAACACACACCTCCACAATAGCTGCTGGCTTTTTCATCAGTAATGCGAGCTACAAAGGACTAGGTGCCGGAACAGTACGAGGTGGTGCTCCACTGGCTCGGCTGGCTATGTACAAAGTCTGCTGGAATCTGTATGATGGAGGAGTGTGTGCAGCTGCTGACATATTGAAAGCCTTGGATGAAGCAATACATGATGGTGTTGATGTATTATCGCTGTCCATAGCGTCTGATCTTCCTCTGTATTCTGATGTGGATGTGCGTAATGGGATCACCTTGGGGGCTTTTCATGCCGTGGCACATGGAATTACTGTTATTTGTTCTGCAGGAAACGACGGTCCAAATGGTCAAACGGTGCAGAGTCCAGCACCGTGGATAATAACTGTGGCAGCAAGTACCATAGACCGCTCTTTCCCTACGCCCATAACACTCGGAAACAACTGGACGACATTGGGTCAAAGCATGTTTACGGGGAAGGATACAGAGTTTGTCAATCTGGTATACCCTGAGGTATCAGAAGAGCTCCAAAGTCCTCGTTACTGCGATTCGCTCTCACCAGATGACGTTTGGGTAAGAGGAAATGTGGTTTTCTGCTTTGTCTTCAATTATCAATATTATGCAGTGCAGGACGCTGCTCAGATTGTCAGAAAAGCTGGTGCTTTAGGGATTATTGTGGCCAGGAATCCCAGTACAGCACCGGTTGATCCGTGTGAAAATAATTTTCCATGCGTCCAAATAAGCCACGAAAATGGAATGCAGATACTCTACTACATCCGTTCTACAAGGCGTCCTAGAGTAAAGATTGGTCCTTCCAAAACACACACTGGCAGACCCGTGCCAACCCGCATTGCAGAATTCTCGTCGAGAGGGCCTAGTTCTGTTGCTCCTGCAATACTTAAGCCAGACATAGCAGCTCCTGGCGTCAATATATTAGCAGCAGTTGCTCCCGACGATGGTTCCTCACAAGATACTGTCTTTGCTTTTAATTCCGGAACTTCGGTGGCAGCTCCTCACGTCTCAGGCATAGTTGCACTGCTCAAATCACTACATCCAAATTGGTCACCTGCTGCCCTCAAATCAGCCATAATAACAACAGCATGGACAACTGATCCCTCTGGGGAGCCTATATTTGTGGAAGGAGAACCAATGAAGCTTGCAGATCCATTTGATTTTGGAGGCGGGATTGTGAATCCAAACAGGGCAGCAGATCCTGGTCTCATCTACGACATGGCCTCTGCAGATTATGTTCAATACCTCTGTAGCATGGGCTACAGTGAACCCAGCATTTCCCTCCTGACGGAACACCCCATCTCCTGCCCCACCAAACAGCCTTCCATGCTTGACATAAACCTGCCTTCCATAACTATACCATCCCTTAGGAAGTCAACAATCATAGTAAGAACGGTCACAAATGTAGGACCTGTCCACTCAAAGTACAAGGCTATCGTAGAGCCTCCCATTGGCATAACCATAGCTGTGCAACCGGATACTTTATGCTTCAACTCTACAGTAAAGGCCATAGCCTTCAGCGTTGTTGTTTCCTCAAATCACCATGTGAGCACAGAATACCTCTTTGGTAGCTTGATATGGCATGACGGTAAGCATGCGGTCAGAAGTCCTGTATCTGTCAGAACTCAGATCACAGAATCCTATAGCTGA 2343 0.4592 MGVFLPRNKNPTFSFILLFFILVLQDTNILPSAAATRSNVYIVHMGKKQHDDPERLTELHHETLTSVIGREESIDSMVYNYKHGFSGFAARLTKTQAKMIAELPNVVQVMPNNLYRMQTTRSWDYLQLPLHSFNSLQHQSKMGDSAIIGLLDSGIWPESKAFSNEGMGPIPSRWRGVCESGKLFDAARSCNRKLIGARYFIKGLQAEYGQPLNSTVFQDYLSPRDASGHGTHTSTIAAGFFISNASYKGLGAGTVRGGAPLARLAMYKVCWNLYDGGVCAAADILKALDEAIHDGVDVLSLSIASDLPLYSDVDVRNGITLGAFHAVAHGITVICSAGNDGPNGQTVQSPAPWIITVAASTIDRSFPTPITLGNNWTTLGQSMFTGKDTEFVNLVYPEVSEELQSPRYCDSLSPDDVWVRGNVVFCFVFNYQYYAVQDAAQIVRKAGALGIIVARNPSTAPVDPCENNFPCVQISHENGMQILYYIRSTRRPRVKIGPSKTHTGRPVPTRIAEFSSRGPSSVAPAILKPDIAAPGVNILAAVAPDDGSSQDTVFAFNSGTSVAAPHVSGIVALLKSLHPNWSPAALKSAIITTAWTTDPSGEPIFVEGEPMKLADPFDFGGGIVNPNRAADPGLIYDMASADYVQYLCSMGYSEPSISLLTEHPISCPTKQPSMLDINLPSITIPSLRKSTIIVRTVTNVGPVHSKYKAIVEPPIGITIAVQPDTLCFNSTVKAIAFSVVVSSNHHVSTEYLFGSLIWHDGKHAVRSPVSVRTQITESYS 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1620 780 CDD Peptidases_S8_3 115 595 IPR034197 -
Prci2g1620 780 ProSiteProfiles Serine proteases, subtilase domain profile. 122 630 - -
Prci2g1620 780 Gene3D - 363 503 - -
Prci2g1620 780 Pfam PA domain 410 482 IPR003137 -
Prci2g1620 780 CDD PA_subtilisin_like 370 496 - -
Prci2g1620 780 Pfam Fibronectin type-III domain 676 771 IPR041469 -
Prci2g1620 780 Pfam Peptidase inhibitor I9 40 117 IPR010259 -
Prci2g1620 780 SUPERFAMILY Subtilisin-like 16 689 IPR036852 GO:0004252|GO:0006508
Prci2g1620 780 MobiDBLite consensus disorder prediction 495 516 - -
Prci2g1620 780 FunFam p69E protein-like 647 774 - -
Prci2g1620 780 Gene3D Peptidase S8/S53 domain 147 643 IPR036852 GO:0004252|GO:0006508
Prci2g1620 780 PRINTS Subtilisin serine protease family (S8) signature 558 574 IPR015500 -
Prci2g1620 780 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Prci2g1620 780 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Prci2g1620 780 Gene3D - 647 774 - -
Prci2g1620 780 FunFam subtilisin-like protease SBT1.5 363 503 - -
Prci2g1620 780 ProSitePatterns Serine proteases, subtilase family, serine active site. 559 569 IPR023828 -
Prci2g1620 780 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 771 IPR045051 -
Prci2g1620 780 Pfam Subtilase family 145 594 IPR000209 GO:0006508|GO:0008236
Prci2g1620 780 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 117 IPR037045 -
Prci2g1620 780 FunFam Subtilisin-like protease SBT1.5 145 373 - -
Prci2g1620 780 FunFam Subtilisin-like protease SBT5.3 30 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1620 Prci-Chr2 12071659 12076279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1620 17 779 Subtilisin-like Serine Gene Family AT4G10540 55.455 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1620 - - pcin:129297806 1561.97