Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1619 ATGCCTTTCTCTAGTTCTGCTTCTTCCATGGCGTTTCGTGTATGCCCAGTAACGCTTTTACCTACCCTTCAAATCTCCCTTCATCCAGTTTCAGCCTTTTATCGTCGACGCTTTTTCCCCGCTGCGAGGTTCAATGAACCATCGAGAGGCTCGCTTAAATTACTATCAAGCAAGGAGTTTTTCGGACCCACCATTCTCACTTTCTCCCAATGCAGTTGCAGTAACTCTCTCGCCAATCCTATAGCTGAAACGGGAATGCTCTTCTCTTTCTTTCATGAGATCGGGTTGGGTTTTGATGGAACCCAAATGCTGTTGGCAAATCACCCTGAGCTTGCAATGGTATCCCTGGATGCATTACATGCTCGGGTTCGTTCTTTACAGTCTCTTGTTGGGTTTGATCATCTTGCTCTGCTGAACTTAGTCGCAAAGCGTCCAAATGTATTAACAGCCATGGAAATTGATGATTTGATATGTTTCGTGCGAGATGAATTGGAAGGGCAGATAAATCAAGCACAGATAAAACGCTTATTATCCGGTACAGAACCAAGATTTTTTGTGGGTTTTGATCAAAAGGTCAAACTGCTTCTCGACAGGGGGGTTCCCTGTGAAAAGATTGTTCATGTGCTCAACAATGTGAATTTGACGAAGGCAGTGTGTCATAGGTCCCTGGATGAAATTAATAGAACGATAGATTTCTTAGACCCTTTTGGTGGCATTAATCTAATTGTAAGGCGTCCTGCAATTTTCAATTATGATTTGGATAATCAACTGATTCCAAGAACCAAATTTCTGACTGAACTTAGTGGAGGAGATGAAGATGGCACGGGGAAGGTGCTGCGTAAGCTCCCGGCAATTTTGAGTTACCGTGTGGAGCATACAGAGGGCCATGTAGAGTTCCTGAGGTCTTTTGTAGGCTTGAATGATCGAGAAATATTTCGGATAATAATGGTTTTTCCTAGTATTGTTAGTGCTAGCAGGGAGAGGAAGCTGCGTCCAAGAATAGAGTTTCTCAAGGATTGTGGGTTGAATTCAAATGAAATCTTCAAGTTCTTGATAAAAGCTCCTTTATTTCTAGGCCATTCATTCCATGAGAACATTGCATATAAACTTGTGTTGCTGGTCAAGATTGGGTACAAATATAGGACAAAGGATTTGGCGACGGCAATCGGATCTACCACTAGGACAAGCTGTGAGAACTTGCAGAAGGTGATTGATCTATTCTTGAGTTATGGGTTTTCATGCGAAGACATAGTTGCTATGAGCAAGAAGCATCCTCAGATACTGCAGTACAATCGTACATCTCTAGAGAAGAAGATGAAGTACCTAGTAGAGGAGATGGATCGTGACATTGAGGAGTTGCTAGCTTTCCCTGCATTCCTTGGTTACAAGCTGGACGACAGAATCAAACAGAGGTTTGAAGAAAAGAGTAAGAGAGGATCAAGAATGTCTCTCAATAAGCTTTTAACTATTTCATCTGAAAGATTCACAACGAAAAAGAAAGAAGGCCTCTGA 1512 0.422 MPFSSSASSMAFRVCPVTLLPTLQISLHPVSAFYRRRFFPAARFNEPSRGSLKLLSSKEFFGPTILTFSQCSCSNSLANPIAETGMLFSFFHEIGLGFDGTQMLLANHPELAMVSLDALHARVRSLQSLVGFDHLALLNLVAKRPNVLTAMEIDDLICFVRDELEGQINQAQIKRLLSGTEPRFFVGFDQKVKLLLDRGVPCEKIVHVLNNVNLTKAVCHRSLDEINRTIDFLDPFGGINLIVRRPAIFNYDLDNQLIPRTKFLTELSGGDEDGTGKVLRKLPAILSYRVEHTEGHVEFLRSFVGLNDREIFRIIMVFPSIVSASRERKLRPRIEFLKDCGLNSNEIFKFLIKAPLFLGHSFHENIAYKLVLLVKIGYKYRTKDLATAIGSTTRTSCENLQKVIDLFLSYGFSCEDIVAMSKKHPQILQYNRTSLEKKMKYLVEEMDRDIEELLAFPAFLGYKLDDRIKQRFEEKSKRGSRMSLNKLLTISSERFTTKKKEGL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1619 503 PANTHER CGI-12 PROTEIN-RELATED 241 497 IPR003690 GO:0003690|GO:0006355
Prci2g1619 503 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Prci2g1619 503 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
Prci2g1619 503 SMART mt_12 348 379 IPR003690 GO:0003690|GO:0006355
Prci2g1619 503 SMART mt_12 239 270 IPR003690 GO:0003690|GO:0006355
Prci2g1619 503 SMART mt_12 418 449 IPR003690 GO:0003690|GO:0006355
Prci2g1619 503 SMART mt_12 312 343 IPR003690 GO:0003690|GO:0006355
Prci2g1619 503 SMART mt_12 450 481 IPR003690 GO:0003690|GO:0006355
Prci2g1619 503 Pfam mTERF 329 495 IPR003690 GO:0003690|GO:0006355
Prci2g1619 503 Pfam mTERF 89 338 IPR003690 GO:0003690|GO:0006355
Prci2g1619 503 Gene3D Transcription termination factor 3, mitochondrial 67 269 IPR038538 -
Prci2g1619 503 Gene3D Transcription termination factor 3, mitochondrial 270 501 IPR038538 -
Prci2g1619 503 FunFam - 68 268 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci2g1619 mTERF 1.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1619 - - qlo:115959231 591.267