Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1609 ATGTCACAGCAGAGGCAAACTAGGATGATGAGTTCAAGCAATGCAAAAGGAGCTGGCGACACCACGTACACCAAGATCTTCGTGGGAGGGTTGGCTTGGGAGACTAAGAGAGACTCTCTGAAACGCTATTTTGAGCAGTTTGGAGAGATCTCAGAGGCTGTTGTTATCACTGACAGAAACACCGGAGCATCAAAAGGCTATGGCTTTGTGACTTTTAAGGAGCCTGACTCTGCAATAAGAGCTTGTCAGAATCCCTACCCTTTGATTGATGGAAGGAGGGCTAATTGTAATCTTGCAGCTCTTGGTGCACGGAAATTCAACCCATCTACCACAGTTGCAGGAGCTGAGAAATTCAACAACAATTCATGGGCCATGGTGCCAATCCCATTTCAAGGCACCTCTTCATATTACAACCAGCACGTGCCTCATCACACTTTTCCCTTTCCACCACCCTACAGGTATCCTGGTTATCCTCCCTCACAAGAAATCTATGCAATGAACTACTACAACGTTTATGGAGGGCAACAGCTTCCATTTCGATGGCGTCCGGCAATGTACCAACCATATTATGGGCTAAGTAATTCAATGCGATTGCCAGCAGAAGCAATGGGGAAAAAGACACAGTACTCTGATATGCCACCCCAGGAAATGTTGGCAGTTGTTGGAGTGCCACCACCAGAACCTATCTCAGTTTCTCCTTCAATACCCACCTCTGGATTAGTCACCGGCACAGCACCAGTTTCTGGTTCTGCAGCAGCCGCCAAAATAGGAGCCTCCCCTGAACACAAGTCTTCAGCTTAG 801 0.4757 MSQQRQTRMMSSSNAKGAGDTTYTKIFVGGLAWETKRDSLKRYFEQFGEISEAVVITDRNTGASKGYGFVTFKEPDSAIRACQNPYPLIDGRRANCNLAALGARKFNPSTTVAGAEKFNNNSWAMVPIPFQGTSSYYNQHVPHHTFPFPPPYRYPGYPPSQEIYAMNYYNVYGGQQLPFRWRPAMYQPYYGLSNSMRLPAEAMGKKTQYSDMPPQEMLAVVGVPPPEPISVSPSIPTSGLVTGTAPVSGSAAAAKIGASPEHKSSA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1609 266 SMART rrm1_1 25 97 IPR000504 GO:0003723
Prci2g1609 266 PANTHER BOULE-RELATED 6 225 - -
Prci2g1609 266 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 26 83 IPR000504 GO:0003723
Prci2g1609 266 Gene3D - 1 110 IPR012677 -
Prci2g1609 266 CDD RRM_RBM24_RBM38_like 24 99 - -
Prci2g1609 266 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 24 101 IPR000504 GO:0003723
Prci2g1609 266 SUPERFAMILY RNA-binding domain, RBD 8 99 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1609 Prci-Chr2 12021086 12023242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1609 4 159 C2H2 Transcription Factor Family AT2G19380 29.714 4.19e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1609 - - adu:107469851 304.293