Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1606 ATGCAGAGTGATCAGCTGAGCACGACTCAGATTCGGATCCGAGCAAGAGCAAGCTCTTGGCTGACTGCAGTGAAAAGGGCTTTCAGGTCTCCAACGAAAGAAAACGATAAGAGAAGAGCAGTAGCAGGAGAAGAGAAGAACACGAACAGCAGGAGGAGGAGGAAAAGTACAATCTCAAAGACCCTTCTAAGAGGGGGAAAGCGACGATGGATTTTTAGGAAGCCTTTTAGTCAAGAACCAGAAGTCTCTCAGGTTTTTGAGGAGAGAACTACAACCACCATCGCTGATATTACAGCAACAAGTAGTAATGTTTCTGAGGCAGCTGATGATGATCCGCAAAGACACGCCATTGCAGTAGCCATGGCAACTACGGCAGCTGCTCAGGCAGCCGTAGCATCTGCTCAGGCAGCCGTGGAGGCTGTTCGGCTTGCAAAGCCGTCCATCTTTGTCAGACGCCATCATGCTGCCACGACTATTCAAGCGGCCTTCAGAGGTTATCTGGCGAGAAGAGCACTAAGGGCACTTAAGGGGTTAGTGAAGCTGCAGGCATTAGTGAGAGGTCATAATGTCCGCAAAAGAGCAAAATTCAATCTTCAGTGCATGCAAGCCCTTGTTCGAGTTCAATCACGGCTGTGTGAACAGAGAGCAAAGAGGATTTCTAATCACGGAGGAAGCTGA 678 0.4912 MQSDQLSTTQIRIRARASSWLTAVKRAFRSPTKENDKRRAVAGEEKNTNSRRRRKSTISKTLLRGGKRRWIFRKPFSQEPEVSQVFEERTTTTIADITATSSNVSEAADDDPQRHAIAVAMATTAAAQAAVASAQAAVEAVRLAKPSIFVRRHHAATTIQAAFRGYLARRALRALKGLVKLQALVRGHNVRKRAKFNLQCMQALVRVQSRLCEQRAKRISNHGGS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1606 225 PANTHER IQ-DOMAIN 5-RELATED 20 218 - -
Prci2g1606 225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 195 IPR027417 -
Prci2g1606 225 MobiDBLite consensus disorder prediction 31 52 - -
Prci2g1606 225 ProSiteProfiles IQ motif profile. 176 203 IPR000048 GO:0005515
Prci2g1606 225 MobiDBLite consensus disorder prediction 31 56 - -
Prci2g1606 225 SMART iq_5 151 173 IPR000048 GO:0005515
Prci2g1606 225 SMART iq_5 174 195 IPR000048 GO:0005515
Prci2g1606 225 Gene3D - 150 203 - -
Prci2g1606 225 ProSiteProfiles IQ motif profile. 152 180 IPR000048 GO:0005515
Prci2g1606 225 Pfam IQ calmodulin-binding motif 153 173 IPR000048 GO:0005515
Prci2g1606 225 Pfam IQ calmodulin-binding motif 179 195 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1606 Prci-Chr2 11989740 11991556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1606 20 223 IQD Protein Family AT4G00820 46.226 4.78e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1606 - - pcin:129302531 354.755